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SCNpilot_bf_inoc_scaffold_371_curated

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Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_371_curated_1
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3..404
DNA (402bp) protein (134aa)
Transposase, IS4 family n=1 Tax=Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338) RepID=G8UKJ2_TANFA
transposase, IS4 family
Transposase, IS4 family {ECO:0000313|EMBL:AEW21585.1}; TaxID=203275 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338); (Bacteroides forsythus).;"
SCNpilot_bf_inoc_scaffold_371_curated_2
Tannerella sp. CAG:118, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(511..2397)
DNA (1887bp) protein (629aa)
FG-GAP repeat protein n=1 Tax=Tannerella sp. CAG:118 RepID=R5IDM2_9PORP
FG-GAP repeat protein {ECO:0000313|EMBL:CCY38424.1}; TaxID=1262978 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:118.;"
FG-GAP repeat-containing protein
SCNpilot_bf_inoc_scaffold_371_curated_3
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2469..3905)
DNA (1437bp) protein (479aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K0XRJ9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX94405.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
SCNpilot_bf_inoc_scaffold_371_curated_4
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3929..5284)
DNA (1356bp) protein (452aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K0XRJ9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX94405.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
SCNpilot_bf_inoc_scaffold_371_curated_5
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5291..7570)
DNA (2280bp) protein (760aa)
Uncharacterized protein n=2 Tax=root RepID=K0X7U5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ66481.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
family 31 glycosyl hydrolase
SCNpilot_bf_inoc_scaffold_371_curated_6
Coprobacter sp. 177, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7631..8731)
DNA (1101bp) protein (367aa)
Arabinan endo-1 5-alpha-L-arabinosidase n=1 Tax=Tannerella sp. CAG:118 RepID=R5I8U8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KHM47613.1}; TaxID=1572646 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter sp. 177.;"
glycoside hydrolase family protein
SCNpilot_bf_inoc_scaffold_371_curated_7
Coprobacter sp. 177, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8877..10481)
DNA (1605bp) protein (535aa)
RagB/SusD domain-containing protein n=1 Tax=Tannerella sp. CAG:118 RepID=R5INY5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KHM47614.1}; TaxID=1572646 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter sp. 177.;"
RagB/SusD domain-containing protein
SCNpilot_bf_inoc_scaffold_371_curated_8
Tannerella sp. CAG:118, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10513..13611)
DNA (3099bp) protein (1033aa)
TonB-linked outer membrane protein SusC/RagA family n=1 Tax=Tannerella sp. CAG:118 RepID=R5IN98_9PORP
TonB-linked outer membrane protein SusC/RagA family {ECO:0000313|EMBL:CCY38427.1}; TaxID=1262978 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:118.;"
TonB-dependent receptor plug
SCNpilot_bf_inoc_scaffold_371_curated_9
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13904..17941
DNA (4038bp) protein (1346aa)
Histidine kinase n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CBY1_SPHS2
Uncharacterized protein {ECO:0000313|EMBL:KJF45330.1}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp. JN14CK-3.;"
histidine kinase
SCNpilot_bf_inoc_scaffold_371_curated_10
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(17988..18449)
DNA (462bp) protein (154aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T343_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ79137.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_371_curated_11
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18533..20170
DNA (1638bp) protein (546aa)
ABC transporter related protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0D1_PALPW
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADQ78290.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_371_curated_12
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20565..22664
DNA (2100bp) protein (700aa)
prolyl oligopeptidase (EC:3.4.21.26); K01322 prolyl oligopeptidase [EC:3.4.21.26]
Prolyl oligopeptidase {ECO:0000313|EMBL:ADQ78271.1}; EC=3.4.21.26 {ECO:0000313|EMBL:ADQ78271.1};; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Prolyl oligopeptidase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T081_PALPW
SCNpilot_bf_inoc_scaffold_371_curated_13
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22860..23807)
DNA (948bp) protein (316aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T483_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ79527.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_371_curated_14
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23847..24152)
DNA (306bp) protein (102aa)
Stress responsive alpha-beta barrel domain-containing protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8K5_PALPW
stress responsive alpha-beta barrel domaiN-containing protein
Stress responsive alpha-beta barrel domain-containing protein {ECO:0000313|EMBL:ADQ81049.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_371_curated_15
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24172..24552)
DNA (381bp) protein (127aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8K6_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ81050.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_371_curated_16
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24594..26171)
DNA (1578bp) protein (526aa)
L-aspartate oxidase (EC:1.4.3.16); K00278 L-aspartate oxidase [EC:1.4.3.16]
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049};; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
L-aspartate oxidase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8K7_PALPW
SCNpilot_bf_inoc_scaffold_371_curated_17
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26184..27308)
DNA (1125bp) protein (375aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8K8_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ81052.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_371_curated_18
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27435..28859)
DNA (1425bp) protein (475aa)
Carbon starvation protein CstA n=1 Tax=Bacteroides sp. CAG:20 RepID=R5F212_9BACE
Carbon starvation protein CstA {ECO:0000313|EMBL:CCX94832.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
carbon starvation protein A
SCNpilot_bf_inoc_scaffold_371_curated_19
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28986..31466)
DNA (2481bp) protein (827aa)
Ferrous iron transport protein B n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4G7_PALPW
ferrous iron transport protein b; K04759 ferrous iron transport protein B
Ferrous iron transport protein B {ECO:0000313|EMBL:ADQ79611.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_371_curated_20
Bacteroides salyersiae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31703..33910)
DNA (2208bp) protein (736aa)
Uncharacterized protein n=1 Tax=Bacteroides salyersiae CL02T12C01 RepID=I8Y7D1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY59050.1}; TaxID=997887 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salyersiae CL02T12C01.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_371_curated_21
Bacteroides salyersiae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33907..34392)
DNA (486bp) protein (162aa)
Por secretion system C-terminal sorting domain-containing protein n=1 Tax=Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988 RepID=R0J864_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY59051.1}; TaxID=997887 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salyersiae CL02T12C01.;"
SCNpilot_bf_inoc_scaffold_371_curated_22
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(34528..35214)
DNA (687bp) protein (229aa)
Response regulator of the LytR/AlgR family n=1 Tax=Flavobacterium sp. CF136 RepID=J3C2T8_9FLAO
LytTR family two component transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
SCNpilot_bf_inoc_scaffold_371_curated_23
Flavobacterium rivuli, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35211..36329)
DNA (1119bp) protein (373aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037B4641
Uncharacterized protein {ECO:0000313|EMBL:KGO87976.1}; TaxID=1121895 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium rivuli WB 3.3-2 = DSM 21788.;"
putative signal transduction histidine kinase
SCNpilot_bf_inoc_scaffold_371_curated_24
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37230..38231)
DNA (1002bp) protein (334aa)
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12); K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12]
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T480_PALPW
SCNpilot_bf_inoc_scaffold_371_curated_25
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38488..39171
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Bacteroides massiliensis dnLKV3 RepID=R9HZA7_9BACE
hypothetical protein
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_371_curated_26
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39196..39906
DNA (711bp) protein (237aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4H9_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ79623.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_371_curated_27
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39915..40451
DNA (537bp) protein (179aa)
Methyltransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4I0_PALPW
methyltransferase
Methyltransferase {ECO:0000313|EMBL:ADQ79624.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_371_curated_28
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

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40735..41034
DNA (300bp) protein (100aa)
addiction module killer protein id=4610497 bin=GWF2_Bacteroidetes_33_38 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
addiction module killer protein
Tax=GWF2_Bacteroidetes_33_38_curated
SCNpilot_bf_inoc_scaffold_371_curated_29
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

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41039..41323
DNA (285bp) protein (95aa)
Addiction module antidote protein id=4610498 bin=GWF2_Bacteroidetes_33_38 species=Cellulophaga algicola genus=Cellulophaga taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
addiction module antidote protein
Tax=GWF2_Bacteroidetes_33_38_curated
SCNpilot_bf_inoc_scaffold_371_curated_30
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41627..42373
DNA (747bp) protein (249aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8R2_PALPW
had-superfamily hydrolase, subfamily ia, variant 3
HAD-superfamily hydrolase, subfamily IA, variant 3 {ECO:0000313|EMBL:ADQ81171.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Displaying items 1-30 of 69 in total

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