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SCNpilot_bf_inoc_scaffold_336_curated

Search features with annotation key words

Displaying items 31-60 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_336_curated_31
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(30500..31627)
DNA (1128bp) protein (376aa)
4-phosphoerythronate dehydrogenase (EC:1.1.1.290); K03473 erythronate-4-phosphate dehydrogenase [EC:1.1.1.290]
Erythronate-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01825, ECO:0000256|SAAS:SAAS00019216}; EC=1.1.1.290 {ECO:0000256|HAMAP-Rule:MF_01825, ECO:0000256|SAAS:SAAS00019244};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Erythronate-4-phosphate dehydrogenase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1Y0_PALPW
SCNpilot_bf_inoc_scaffold_336_curated_32
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(31672..32961)
DNA (1290bp) protein (430aa)
hypothetical protein MsalJ2_14741 id=4945022 bin=GWA2_Bacteroidetes_42_15 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
hypothetical protein
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_336_curated_33
Bacteroides cellulosilyticus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32993..33493)
DNA (501bp) protein (167aa)
TIGR02436 family protein n=2 Tax=Bacteroides RepID=E2NIG2_9BACE
TIGR02436 family protein {ECO:0000313|EMBL:EEF88313.1}; TaxID=537012 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides cellulosilyticus DSM 14838.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_336_curated_34
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33441..34517)
DNA (1077bp) protein (359aa)
gck2; Gck (EC:2.7.1.45)
2-keto-3-deoxygluconate kinase id=4945024 bin=GWA2_Bacteroidetes_42_15 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
Tax=GWE2_Bacteroidetes_42_39_curated
SCNpilot_bf_inoc_scaffold_336_curated_35
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34555..35367)
DNA (813bp) protein (271aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1X8_PALPW
short-chain dehydrogenase/reductase sdr
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADQ78722.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_336_curated_36
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35414..36439)
DNA (1026bp) protein (342aa)
Transcriptional regulator, LacI family n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1X7_PALPW
transcriptional regulator, laci family; K02529 LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ADQ78721.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_336_curated_37
Odoribacter laneus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(36683..37768)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Odoribacter laneus CAG:561 RepID=R5URK7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EHP48854.1}; TaxID=742817 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter laneus YIT 12061.;"
hypothetical protein rbh
SCNpilot_bf_inoc_scaffold_336_curated_38
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(37857..39098)
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Prevotella marshii DSM 16973 RepID=E0NPD1_9BACT
nucleic acid-binding domain protein
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_336_curated_39
Odoribacter laneus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(39135..40001)
DNA (867bp) protein (289aa)
Putative uncharacterized protein n=1 Tax=Odoribacter laneus YIT 12061 RepID=H1DG32_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EHP48855.1}; TaxID=742817 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter laneus YIT 12061.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_336_curated_40
Odoribacter laneus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(40015..42597)
DNA (2583bp) protein (861aa)
Putative uncharacterized protein n=1 Tax=Odoribacter laneus YIT 12061 RepID=H1DG33_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EHP48856.1}; TaxID=742817 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter laneus YIT 12061.;"
hypothetical protein rbh
SCNpilot_bf_inoc_scaffold_336_curated_41
Bacteroides thetaiotaomicron CAG:40, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(42630..43793)
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Bacteroides thetaiotaomicron CAG:40 RepID=R7KXH1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDE80418.1}; TaxID=1263054 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides thetaiotaomicron CAG:40.;"
DNA/RNA endonuclease G, NUC1
SCNpilot_bf_inoc_scaffold_336_curated_42
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

44066..44650
DNA (585bp) protein (195aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2X9_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ79073.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_336_curated_43
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

44651..45955
DNA (1305bp) protein (435aa)
udp-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7); K00790 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2Y0_PALPW
SCNpilot_bf_inoc_scaffold_336_curated_44
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

46097..46609
DNA (513bp) protein (171aa)
Ferritin {ECO:0000256|RuleBase:RU361145}; EC=1.16.3.2 {ECO:0000256|RuleBase:RU361145};; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
ferritin Dps family protein; K02217 ferritin [EC:1.16.3.1]
Ferritin n=9 Tax=Clostridium RepID=N9WTF1_9CLOT
SCNpilot_bf_inoc_scaffold_336_curated_45
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(46711..46866)
DNA (156bp) protein (52aa)
Putative uncharacterized protein id=4604000 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
Tax=GWA2_Bacteroidetes_32_17_curated
SCNpilot_bf_inoc_scaffold_336_curated_46

Not on your lists

comp(46859..47359)
DNA (501bp) protein (167aa)
Uncharacterized protein {ECO:0000313|EMBL:KKK57123.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Putative uncharacterized protein id=1764471 bin=GWD2_Bacteroidales_45_23 species=Prevotella buccae genus=Prevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein
SCNpilot_bf_inoc_scaffold_336_curated_47
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(47566..48954)
DNA (1389bp) protein (463aa)
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain i; K01840 phosphomannomutase [EC:5.4.2.8]
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0G5_PALPW
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I {ECO:0000313|EMBL:ADQ78324.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_336_curated_48
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(48993..49538)
DNA (546bp) protein (182aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0G6_PALPW
hypothetical protein
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_336_curated_49
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(49560..51989)
DNA (2430bp) protein (810aa)
aspartate kinase; homoserine dehydrogenase (EC:1.1.1.3 2.7.2.4); K12524 bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
Aspartate kinase homoserine dehydrogenase {ECO:0000313|EMBL:ADQ78327.1}; EC=1.1.1.3 {ECO:0000313|EMBL:ADQ78327.1};; EC=2.7.2.4 {ECO:0000313|EMBL:ADQ78327.1};; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Aspartate kinase; homoserine dehydrogenase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0G8_PALPW
SCNpilot_bf_inoc_scaffold_336_curated_50
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

52607..54757
DNA (2151bp) protein (717aa)
ATP-dependent chaperone ClpB n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T073_PALPW
ATP-dependent chaperone clpb; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_336_curated_51
unknown

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comp(56386..56667)
DNA (282bp) protein (94aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_336_curated_52
Cellulophaga algicola, Cellulophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(63512..64873)
DNA (1362bp) protein (454aa)
Putative uncharacterized protein n=1 Tax=Cellulophaga algicola (strain DSM 14237 / IC166 / ACAM 630) RepID=E6X7X6_CELAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV47569.1}; TaxID=688270 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cellulophaga.;" source="Cellulophaga algicola (strain DSM 14237 / IC166 / ACAM 630).;"
SCNpilot_bf_inoc_scaffold_336_curated_53
Prevotella multisaccharivorax, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(64925..65407)
DNA (483bp) protein (161aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=688246 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella multisaccharivorax DSM 17128.;"
hypothetical protein n=1 Tax=Porphyromonas levii RepID=UPI00036AA938
cas2; CRISPR-associated endoribonuclease Cas2
SCNpilot_bf_inoc_scaffold_336_curated_54
Prevotella nigrescens, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(65421..66440)
DNA (1020bp) protein (340aa)
VirE domain protein n=1 Tax=Prevotella nigrescens ATCC 33563 RepID=F9DBD0_9BACT
VirE domain protein {ECO:0000313|EMBL:EGQ14290.1}; TaxID=997352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella nigrescens ATCC 33563.;"
VirE N-terminal domain-containing protein
SCNpilot_bf_inoc_scaffold_336_curated_55
Prevotella sp. oral taxon 317, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(66443..67423)
DNA (981bp) protein (327aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=575615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella sp. oral taxon 317 str. F0108.;"
cas1_2; CRISPR-associated endonuclease Cas1 (EC:3.1.-.-); K15342 CRISP-associated protein Cas1
hypothetical protein n=1 Tax=Porphyromonas levii RepID=UPI000369BDE6
SCNpilot_bf_inoc_scaffold_336_curated_56
Prevotella sp. oral taxon 317, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(67450..68889)
DNA (1440bp) protein (480aa)
Uncharacterized protein n=1 Tax=Prevotella sp. oral taxon 317 str. F0108 RepID=D3IFE6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFC68742.1}; TaxID=575615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella sp. oral taxon 317 str. F0108.;"
ATP-dependent exodeoxyribonuclease
SCNpilot_bf_inoc_scaffold_336_curated_57
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(68894..69268)
DNA (375bp) protein (125aa)
CRISPR-associated protein, TM1812 family n=1 Tax=Prevotella multisaccharivorax DSM 17128 RepID=F8N7A0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:BAR47782.1}; TaxID=1307832 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia 3313.;"
CRISPR-associated protein
SCNpilot_bf_inoc_scaffold_336_curated_58
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

comp(69273..70511)
DNA (1239bp) protein (413aa)
hypothetical protein n=1 Tax=Anaerophaga thermohalophila RepID=UPI000237BCD6
Tax=CG_Bacteroid_02
SCNpilot_bf_inoc_scaffold_336_curated_59
Prevotella sp. F0091, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(70514..71617)
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Prevotella sp. F0091 RepID=U2IKQ3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ERJ74481.1}; TaxID=1227276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella sp. F0091.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_336_curated_60
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(71876..73624)
DNA (1749bp) protein (583aa)
p200 (Fragment) n=1 Tax=Babesia bovis RepID=B8XR78_BABBO
Uncharacterized protein {ECO:0000313|EMBL:BAR47779.1}; TaxID=1307832 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia 3313.;"
hypothetical protein
Displaying items 31-60 of 66 in total

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