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SCNpilot_bf_inoc_scaffold_336_curated

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Displaying items 1-30 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_336_curated_1
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(800..2104)
DNA (1305bp) protein (435aa)
folc bifunctional protein; K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
FolC bifunctional protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T251_PALPW
FolC bifunctional protein {ECO:0000313|EMBL:ADQ78795.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_336_curated_2
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2116..2784)
DNA (669bp) protein (223aa)
Alanine racemase domain protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T257_PALPW
alanine racemase; K06997
Alanine racemase domain protein {ECO:0000313|EMBL:ADQ78801.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_336_curated_3
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2797..3237)
DNA (441bp) protein (147aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T256_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ78800.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_336_curated_4
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3366..4562
DNA (1197bp) protein (399aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T289_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ78833.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_336_curated_5
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4566..6704)
DNA (2139bp) protein (713aa)
Tex-like protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2E0_PALPW
Tex-like protein {ECO:0000313|EMBL:ADQ78884.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
tex-like protein; K06959 uncharacterized protein
SCNpilot_bf_inoc_scaffold_336_curated_6
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6715..7713)
DNA (999bp) protein (333aa)
DNA polymerase iii, delta subunit; K02340 DNA polymerase III subunit delta [EC:2.7.7.7]
DNA polymerase III, delta subunit n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2E1_PALPW
DNA polymerase III, delta subunit {ECO:0000313|EMBL:ADQ78885.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_336_curated_7
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7731..8504)
DNA (774bp) protein (258aa)
amp nucleosidase; K01241 AMP nucleosidase [EC:3.2.2.4]
AMP nucleosidase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2E2_PALPW
AMP nucleosidase {ECO:0000313|EMBL:ADQ78886.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_336_curated_8
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8558..9007
DNA (450bp) protein (150aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2E3_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ78887.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_336_curated_9
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9004..9915)
DNA (912bp) protein (304aa)
dihydroorotate oxidase b, catalytic subunit (EC:1.3.98.1); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1]
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Dihydroorotate dehydrogenase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2E8_PALPW
SCNpilot_bf_inoc_scaffold_336_curated_10
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9909..10679)
DNA (771bp) protein (257aa)
dihydroorotate oxidase b, electron transfer subunit (EC:1.3.98.1); K02823 dihydroorotate dehydrogenase electron transfer subunit
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2E9_PALPW
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; Dihydroorotate oxidase B, electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_336_curated_11
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10755..11339)
DNA (585bp) protein (195aa)
Helix-turn-helix domain protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2F0_PALPW
helix-turN-helix domain protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:ADQ78894.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_336_curated_12
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12504..13277)
DNA (774bp) protein (258aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2F2_PALPW
hypothetical protein; K07164
Uncharacterized protein {ECO:0000313|EMBL:ADQ78896.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_336_curated_13
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13283..14380)
DNA (1098bp) protein (366aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp. JN14CK-3.;"
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2F3_PALPW
hypothetical protein
SCNpilot_bf_inoc_scaffold_336_curated_14
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14405..14842)
DNA (438bp) protein (146aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2F4_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ78898.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_336_curated_15
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14862..16649)
DNA (1788bp) protein (596aa)
amidophosphoribosyltransferase (EC:2.4.2.14); K00764 amidophosphoribosyltransferase [EC:2.4.2.14]
Amidophosphoribosyltransferase {ECO:0000313|EMBL:ADQ78953.1}; EC=2.4.2.14 {ECO:0000313|EMBL:ADQ78953.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Amidophosphoribosyltransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2K9_PALPW
SCNpilot_bf_inoc_scaffold_336_curated_16
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16720..17706)
DNA (987bp) protein (329aa)
Quinone oxidoreductase, YhdH/YhfP family id=2921995 bin=GWF2_Bacteroidetes_33_16 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
quinone oxidoreductase, yhdh/yhfp family
Quinone oxidoreductase, YhdH/YhfP family {ECO:0000313|EMBL:ADQ78957.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_336_curated_17
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17752..18144)
DNA (393bp) protein (131aa)
Putative uncharacterized protein id=2921990 bin=GWF2_Bacteroidetes_33_16 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ78958.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_336_curated_18
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18260..19129
DNA (870bp) protein (290aa)
Putative uncharacterized protein id=2921985 bin=GWF2_Bacteroidetes_33_16 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ78959.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_336_curated_19
Sulfurovum sp. AR, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

19171..20457
DNA (1287bp) protein (429aa)
Polysaccharide biosynthesis protein n=1 Tax=Sulfurovum sp. AR RepID=I2K7F8_9PROT
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EIF51160.1}; TaxID=1165841 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AR.;"
polysaccharide biosynthesis protein
SCNpilot_bf_inoc_scaffold_336_curated_20
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20438..21004
DNA (567bp) protein (189aa)
arsenate reductase n=1 Tax=Anaerophaga thermohalophila RepID=UPI000237BEB2
Maltose O-acetyltransferase {ECO:0000313|EMBL:GAO28726.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;"
arsenate reductase
SCNpilot_bf_inoc_scaffold_336_curated_21
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21025..22041)
DNA (1017bp) protein (339aa)
Putative xylanase/chitin deacetylase id=2113536 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
polysaccharide deacetylase
Tax=GWA2_Bacteroidetes_31_9_curated
SCNpilot_bf_inoc_scaffold_336_curated_22
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22070..22972)
DNA (903bp) protein (301aa)
oxidoreductase; K03340 diaminopimelate dehydrogenase [EC:1.4.1.16]
Diaminopimelate dehydrogenase n=8 Tax=Bacteroidales RepID=C7X5N7_9PORP
Diaminopimelate dehydrogenase {ECO:0000313|EMBL:EKN27468.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
SCNpilot_bf_inoc_scaffold_336_curated_23
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23017..24840)
DNA (1824bp) protein (608aa)
UPF0313 protein Palpr_0620 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T232_PALPW
radical sam domain protein
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_336_curated_24
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24918..25790
DNA (873bp) protein (291aa)
purine or other phosphorylase family 1; K00757 uridine phosphorylase [EC:2.4.2.3]
Purine or other phosphorylase family 1 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1J0_PALPW
Purine or other phosphorylase family 1 {ECO:0000313|EMBL:ADQ78584.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_336_curated_25
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25817..27211
DNA (1395bp) protein (465aa)
tRNA modification GTPase trme; K03650 tRNA modification GTPase [EC:3.6.-.-]
tRNA modification GTPase MnmE n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1I9_PALPW
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_336_curated_26
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27226..27591)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K5Z7F6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN07055.1}; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii CL02T12C30.;"
Predicted transcription regulator containing HTH domain
SCNpilot_bf_inoc_scaffold_336_curated_27
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27602..27895)
DNA (294bp) protein (98aa)
Uncharacterized protein n=2 Tax=Bacteroides dorei RepID=I8V4W8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY31781.1}; TaxID=997876 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei CL02T12C06.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_336_curated_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28057..28401
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9UM30_BACVU
Uncharacterized protein {ECO:0000313|EMBL:KDS50815.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_336_curated_29
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28398..28697
DNA (300bp) protein (100aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K5YYJ4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB55981.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
putative DNA binding protein
SCNpilot_bf_inoc_scaffold_336_curated_30
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28845..30299)
DNA (1455bp) protein (485aa)
6-phosphogluconate dehydrogenase (EC:1.1.1.44); K00033 6-phosphogluconate dehydrogenase [EC:1.1.1.44]
6-phosphogluconate dehydrogenase, decarboxylating id=4945018 bin=GWA2_Bacteroidetes_42_15 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
Tax=GWE2_Bacteroidetes_42_39_curated
Displaying items 1-30 of 66 in total

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