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SCNpilot_bf_inoc_scaffold_341_curated

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Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_341_curated_1
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

67..414
DNA (348bp) protein (116aa)
hypothetical protein ANA_C20489 id=1863101 bin=GWD2_Bacteroidetes_40_43 species=Anabaena sp. 90 genus=Anabaena taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein
Tax=GWE2_Bacteroidetes_40_63_curated
SCNpilot_bf_inoc_scaffold_341_curated_2
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

463..816
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 RepID=U6RBY1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOA52693.1}; TaxID=1121098 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM; 13223.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_341_curated_3
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(825..2123)
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D20 RepID=D2EVM2_9BACE
hypothetical protein
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_341_curated_4
Barnesiella viscericola, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2125..3039)
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Bacteroides nordii CL02T12C05 RepID=I9SGZ9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:AHF12238.1}; TaxID=880074 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella viscericola DSM 18177.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_341_curated_5
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3065..4687)
DNA (1623bp) protein (541aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9HPH5_9BACE
hypothetical protein
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_341_curated_6
Bacteroides salyersiae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4844..8116)
DNA (3273bp) protein (1091aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides salyersiae CL02T12C01 RepID=I9T0L6_9BACE
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY62113.1}; TaxID=997887 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salyersiae CL02T12C01.;"
hypothetical protein rbh
SCNpilot_bf_inoc_scaffold_341_curated_7
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8156..9739
DNA (1584bp) protein (528aa)
Ig domain protein group 2 domain protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1E9_PALPW
ig domain protein group 2 domain protein
Ig domain protein group 2 domain protein {ECO:0000313|EMBL:ADQ78543.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_341_curated_8
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9825..10565
DNA (741bp) protein (247aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5L8_PALPW
hypothetical protein; K02066 putative ABC transport system permease protein
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_341_curated_9
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10656..11414
DNA (759bp) protein (253aa)
ABC transporter related protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5L9_PALPW
ABC transporter; K02065 putative ABC transport system ATP-binding protein
ABC transporter related protein {ECO:0000313|EMBL:ADQ80013.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_341_curated_10
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11499..12260
DNA (762bp) protein (254aa)
exodeoxyribonuclease iii xth (EC:3.1.11.2); K01142 exodeoxyribonuclease III [EC:3.1.11.2]
Exodeoxyribonuclease III Xth n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5M0_PALPW
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_341_curated_11
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12387..13787
DNA (1401bp) protein (467aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5M1_PALPW
hypothetical protein
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_341_curated_12
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13804..15897
DNA (2094bp) protein (698aa)
TonB-dependent receptor n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5M3_PALPW
tonb-dependent receptor; K02014 iron complex outermembrane recepter protein
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_341_curated_13
Odoribacter splanchnicus CAG:14, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15928..16413)
DNA (486bp) protein (162aa)
hypothetical protein, partial n=1 Tax=Anaerophaga thermohalophila RepID=UPI0003814B89
Uncharacterized protein {ECO:0000313|EMBL:CDB06896.1}; TaxID=1263090 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter splanchnicus CAG:14.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_341_curated_14
Caminibacter mediatlanticus, Caminibacter, Nautiliales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16410..16721)
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Anaerophaga thermohalophila RepID=UPI000237D415
Uncharacterized protein {ECO:0000313|EMBL:EDM24064.1}; TaxID=391592 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Nautiliales; Nautiliaceae; Caminibacter.;" source="Caminibacter mediatlanticus TB-2.;"
DNA polymerase beta domain protein region
SCNpilot_bf_inoc_scaffold_341_curated_15
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16839..17048
DNA (210bp) protein (70aa)
Putative uncharacterized protein id=3825599 bin=GWF2_Bacteroidetes_33_16 species=Tannerella sp. 6_1_58FAA_CT1 genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein
Tax=GWE2_Bacteroidetes_32_14_curated
SCNpilot_bf_inoc_scaffold_341_curated_16
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17098..18639
DNA (1542bp) protein (514aa)
cytochrome bd quinol oxidase subunit 1 apoprotein (EC:1.10.3.-); K00425 cytochrome d ubiquinol oxidase subunit I [EC:1.10.3.-]
Cytochrome bd quinol oxidase subunit 1 apoprotein {ECO:0000313|EMBL:ADQ79996.1}; EC=1.10.3.- {ECO:0000313|EMBL:ADQ79996.1};; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Cytochrome bd quinol oxidase subunit 1 apoprotein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5K2_PALPW
SCNpilot_bf_inoc_scaffold_341_curated_17
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18725..19870
DNA (1146bp) protein (382aa)
cytochrome bd quinol oxidase subunit 2 apoprotein (EC:1.10.3.-); K00426 cytochrome d ubiquinol oxidase subunit II [EC:1.10.3.-]
Cytochrome bd quinol oxidase subunit 2 apoprotein {ECO:0000313|EMBL:ADQ79995.1}; EC=1.10.3.- {ECO:0000313|EMBL:ADQ79995.1};; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Cytochrome bd quinol oxidase subunit 2 apoprotein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5K1_PALPW
SCNpilot_bf_inoc_scaffold_341_curated_18
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20007..20771
DNA (765bp) protein (255aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T748_PALPW
hypothetical protein
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_341_curated_19
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20876..22369)
DNA (1494bp) protein (498aa)
Polysaccharide biosynthesis protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5T4_PALPW
polysaccharide biosynthesis protein
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_341_curated_20
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22381..23118)
DNA (738bp) protein (246aa)
Heat shock protein DnaJ domain protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6R6_PALPW
heat shock protein dnaj domain protein; K05801 DnaJ like chaperone protein
Heat shock protein DnaJ domain protein {ECO:0000313|EMBL:ADQ80410.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_341_curated_21
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23272..25095
DNA (1824bp) protein (608aa)
TonB-dependent receptor id=4610621 bin=GWF2_Bacteroidetes_33_38 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
tonb-dependent receptor; K02014 iron complex outermembrane recepter protein
Tax=GWF2_Bacteroidetes_33_38_curated
SCNpilot_bf_inoc_scaffold_341_curated_22
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25119..25604
DNA (486bp) protein (162aa)
shikimate kinase (EC:2.7.1.71); K00891 shikimate kinase [EC:2.7.1.71]
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Shikimate kinase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5I8_PALPW
SCNpilot_bf_inoc_scaffold_341_curated_23
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25620..27236)
DNA (1617bp) protein (539aa)
alpha-N-arabinofuranosidase (EC:3.2.1.55); K01209 alpha-N-arabinofuranosidase [EC:3.2.1.55]
Alpha-L-arabinofuranosidase domain protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IVU7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKB52951.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
SCNpilot_bf_inoc_scaffold_341_curated_24
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27598..31395
DNA (3798bp) protein (1266aa)
DNA polymerase iii, alpha subunit (EC:2.7.7.7); K02337 DNA polymerase III subunit alpha [EC:2.7.7.7]
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
DNA polymerase III, alpha subunit n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5D5_PALPW
SCNpilot_bf_inoc_scaffold_341_curated_25
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31520..31834
DNA (315bp) protein (105aa)
Thioredoxin n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5D6_PALPW
thioredoxin; K03671 thioredoxin 1
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_341_curated_26
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31829..32545)
DNA (717bp) protein (239aa)
methyltransferase type 11; K15460 tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
tRNA1(Val) (adenine(37)-N6)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01872, ECO:0000256|SAAS:SAAS00016413}; EC=2.1.1.223 {ECO:0000256|HAMAP-Rule:MF_01872, ECO:0000256|SAAS:SAAS00016405};; tRNA m6A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01872}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
tRNA1(Val) (adenine(37)-N6)-methyltransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5D7_PALPW
SCNpilot_bf_inoc_scaffold_341_curated_27
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32550..33116)
DNA (567bp) protein (189aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5D8_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ79932.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_341_curated_28
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33325..34092)
DNA (768bp) protein (256aa)
exonuclease RNAse t and DNA polymerase iii; K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7]
Exonuclease RNase T and DNA polymerase III n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5D9_PALPW
Exonuclease RNase T and DNA polymerase III {ECO:0000313|EMBL:ADQ79933.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_341_curated_29
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34137..35321)
DNA (1185bp) protein (395aa)
DNA polymerase iii, beta subunit (EC:2.7.7.7); K02338 DNA polymerase III subunit beta [EC:2.7.7.7]
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
DNA polymerase III subunit beta n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5E0_PALPW
SCNpilot_bf_inoc_scaffold_341_curated_30
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35505..36479)
DNA (975bp) protein (325aa)
N-acetyL-gamma-glutamyL-phosphate reductase (EC:1.2.1.38); K00145 N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00150}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5Y2_PALPW
Displaying items 1-30 of 53 in total

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