ggKbase home page

SCNpilot_bf_inoc_scaffold_409_curated_10

Organism: scnpilot_dereplicated_Bacteroidales_1

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 2 ASCG 13 / 38
Location: comp(10508..11434)

Top 3 Functional Annotations

Value Algorithm Source
Transcription antitermination factor NusB n=3 Tax=Parabacteroides RepID=A7AKB9_9PORP similarity UNIREF
DB: UNIREF100
  • Identity: 78.2
  • Coverage: 308.0
  • Bit_score: 501
  • Evalue 5.40e-139
N utilization substance protein B homolog {ECO:0000256|SAAS:SAAS00057003}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.2
  • Coverage: 308.0
  • Bit_score: 501
  • Evalue 7.60e-139
N utilization substance protein; K03625 N utilization substance protein B similarity KEGG
DB: KEGG
  • Identity: 77.6
  • Coverage: 308.0
  • Bit_score: 498
  • Evalue 1.40e-138

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Parabacteroides merdae CAG:48 → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 927
ATGATCAACAGAATTTTAATTCGCATTAAAGTTTTACAGATAGTATACGCATACTATCAGAACGGAAACAAAGACCTCAAAACTGCAGAAAACGAATTGCTTTTCAGTCTTCAAAAGTCATACGACTTATACCATTATTTCCTTCTTCTCATAGTTGAAACAACCAGACTTCAAAAAAGAGTGCTGGACAATCGCAAAAACAAGTATGTTCCAACCCAGGAAGAGTTGAATCCCAACACCCGATTTGTAGATAACCGCTTTGCTGCACAAGTAGAAGCAAACGAGTCTCTTTTGGCTTATGTGAAAGACAATGGTATTTCATGGAACAACGAAGAAGATTTTGTTAAATCGGTACTGGATATCATTTTAAATTCGGATATCTATGCTGATTATCTGGCAGATGCCAACGATTCTTACGAAGCCGACCGCGACTTCTGGCGGATTGTTTTCAAGAAACTGATCTGCGGTAACGAAGAAATCGAATCCTATCTGGAAGATAAAAGTATTTATTGGAACGACGACATTGAGATTGTTCAGACTTTCACGTTGAAAACCATCAAGAAGTTTTCAGAAAAAGAGGGAAGCAAACAGCCTTTGTTGCCAATGTTCAAAGATCAGGACGACCAGGAATTCGCTATCAAATTATTCCGTCAGTCATTATTGAAAGGAAGCGAATACCGCGAACGTATTCAAAAGCACATGAAAAACTGGGAGAGCGAACGTATTGCCAATATGGACCAGATCATCATGCAGGTTGCCCTGGCTGAAATCATGAATTTCCCAACAATACCTATCAATGTAAGCCTGAACGAATACATCGACACAGCTAAATACTACAGTACACCCAAAAGCGGTAATTTCATCAATGGAATTCTCGATTCTGTTGTAACTGAGCTAAAAAATGAGCGTTTGTTGATTAAAGATTAA
PROTEIN sequence
Length: 309
MINRILIRIKVLQIVYAYYQNGNKDLKTAENELLFSLQKSYDLYHYFLLLIVETTRLQKRVLDNRKNKYVPTQEELNPNTRFVDNRFAAQVEANESLLAYVKDNGISWNNEEDFVKSVLDIILNSDIYADYLADANDSYEADRDFWRIVFKKLICGNEEIESYLEDKSIYWNDDIEIVQTFTLKTIKKFSEKEGSKQPLLPMFKDQDDQEFAIKLFRQSLLKGSEYRERIQKHMKNWESERIANMDQIIMQVALAEIMNFPTIPINVSLNEYIDTAKYYSTPKSGNFINGILDSVVTELKNERLLIKD*