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SCNpilot_bf_inoc_scaffold_409_curated

Search features with annotation key words

Displaying items 1-30 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_409_curated_1
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(583..2124)
DNA (1542bp) protein (514aa)
Uncharacterized protein n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K5YVS1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN07209.1}; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii CL02T12C30.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_409_curated_2
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2311..3495)
DNA (1185bp) protein (395aa)
8-amino-7-oxononanoate synthase n=3 Tax=Parabacteroides RepID=K5ZM47_9PORP
8-amino-7-oxononanoate synthase {ECO:0000313|EMBL:EKN12335.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
8-amino-7-oxononanoate synthase
SCNpilot_bf_inoc_scaffold_409_curated_3
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3686..4657
DNA (972bp) protein (324aa)
Lipid kinase, YegS/Rv2252/BmrU family {ECO:0000313|EMBL:EFK63107.1}; EC=2.7.1.- {ECO:0000313|EMBL:EFK63107.1};; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
Uncharacterized protein n=8 Tax=Bacteroidales RepID=A6LD47_PARD8
hypothetical protein; K07029
SCNpilot_bf_inoc_scaffold_409_curated_4
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4642..5355)
DNA (714bp) protein (238aa)
tRNA1(Val) (adenine(37)-N6)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01872, ECO:0000256|SAAS:SAAS00016413}; EC=2.1.1.223 {ECO:0000256|HAMAP-Rule:MF_01872, ECO:0000256|SAAS:SAAS00016405};; tRNA m6A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01872}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
tRNA1(Val) (adenine(37)-N6)-methyltransferase n=1 Tax=Parabacteroides johnsonii CAG:246 RepID=R5DPE3_9PORP
hypothetical protein
SCNpilot_bf_inoc_scaffold_409_curated_5
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5452..7911
DNA (2460bp) protein (820aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
ATP-dependent protease; K01338 ATP-dependent Lon protease [EC:3.4.21.53]
Lon protease n=3 Tax=Parabacteroides RepID=B7BCH1_9PORP
SCNpilot_bf_inoc_scaffold_409_curated_6
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7955..8389)
DNA (435bp) protein (145aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=B7BCF3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEC95885.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_409_curated_7
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8530..9114)
DNA (585bp) protein (195aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
dephospho-CoA kinase; K00859 dephospho-CoA kinase [EC:2.7.1.24]
Dephospho-CoA kinase n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5Z9R6_9PORP
SCNpilot_bf_inoc_scaffold_409_curated_8
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9114..10121)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2B2C1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB52769.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_409_curated_9
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10133..10444)
DNA (312bp) protein (104aa)
Preprotein translocase, YajC subunit n=3 Tax=Parabacteroides RepID=K5Z750_9PORP
Preprotein translocase, YajC subunit {ECO:0000313|EMBL:KKB59999.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
hypothetical protein; K03210 preprotein translocase subunit YajC
SCNpilot_bf_inoc_scaffold_409_curated_10
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10508..11434)
DNA (927bp) protein (309aa)
Transcription antitermination factor NusB n=3 Tax=Parabacteroides RepID=A7AKB9_9PORP
N utilization substance protein B homolog {ECO:0000256|SAAS:SAAS00057003}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
N utilization substance protein; K03625 N utilization substance protein B
SCNpilot_bf_inoc_scaffold_409_curated_11
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11656..12024
DNA (369bp) protein (123aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K5YVR2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB52772.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_409_curated_12
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12136..12306)
DNA (171bp) protein (57aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K5ZUT6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB55861.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
ferredoxin
SCNpilot_bf_inoc_scaffold_409_curated_13
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12513..13232
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X5Z4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN07326.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_409_curated_14
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13219..14052)
DNA (834bp) protein (278aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii CL02T12C30.;"
phosphatidate cytidylyltransferase; K00981 phosphatidate cytidylyltransferase [EC:2.7.7.41]
Phosphatidate cytidylyltransferase n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K5Z743_9PORP
SCNpilot_bf_inoc_scaffold_409_curated_15
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14187..16199)
DNA (2013bp) protein (671aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
metalloprotease FtsH; K03798 cell division protease FtsH [EC:3.4.24.-]
ATP-dependent zinc metalloprotease FtsH n=3 Tax=Parabacteroides RepID=B7BCE2_9PORP
SCNpilot_bf_inoc_scaffold_409_curated_16
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16235..16594)
DNA (360bp) protein (120aa)
Ribosomal silencing factor RsfS n=3 Tax=Parabacteroides RepID=K5YVQ9_9PORP
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
hypothetical protein; K09710 ribosome-associated protein
SCNpilot_bf_inoc_scaffold_409_curated_17
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

17043..18224
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 3_2_5 RepID=C6I7J0_9BACE
site-specific recombinase, phage integrase family
Tax=BJP_IG2103_Bacteroidetes_41_9
SCNpilot_bf_inoc_scaffold_409_curated_18
unknown

Not on your lists

comp(18246..18731)
DNA (486bp) protein (162aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_409_curated_19
Crinalium epipsammum, Crinalium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(18731..19288)
DNA (558bp) protein (186aa)
Putative uncharacterized protein n=1 Tax=Myroides odoratimimus CCUG 12901 RepID=H1H0S0_9FLAO
cell wall hydrolase/autolysin
Cell wall hydrolase/autolysin {ECO:0000313|EMBL:AFZ13079.1}; TaxID=1173022 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Crinalium.;" source="Crinalium epipsammum PCC 9333.;"
SCNpilot_bf_inoc_scaffold_409_curated_20
Tannerella sp. CAG:118, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19285..19647)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Tannerella sp. CAG:118 RepID=R5INP5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCY38527.1}; TaxID=1262978 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:118.;"
SCNpilot_bf_inoc_scaffold_409_curated_21
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19737..21473)
DNA (1737bp) protein (579aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. HPS0048 RepID=U6R7G2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOA52044.1}; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_409_curated_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21473..24076)
DNA (2604bp) protein (868aa)
Phage tail tape measure protein, TP901 family, core region n=1 Tax=Bacteroides fragilis HMW 616 RepID=K1FN18_BACFG
Phage tail tape measure protein, TP901 family, core region {ECO:0000313|EMBL:EYA40073.1}; TaxID=1339279 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 20793-3.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_409_curated_23
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24080..24544)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D2 RepID=E5CG53_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFS33726.1}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_409_curated_24
unknown

Not on your lists

comp(24643..24804)
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_409_curated_25
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24835..25200)
DNA (366bp) protein (122aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J177_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK00451.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
SCNpilot_bf_inoc_scaffold_409_curated_26
unknown

Not on your lists

comp(25202..25453)
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_409_curated_27
unknown

Not on your lists

comp(25450..25683)
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_409_curated_28
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25680..25913)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K5Y898_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN09452.1}; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii CL02T12C30.;"
SCNpilot_bf_inoc_scaffold_409_curated_29
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25928..26689)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZWX8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN15986.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_409_curated_30
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27028..28203)
DNA (1176bp) protein (392aa)
Uncharacterized protein n=2 Tax=Porphyromonas gingivalis RepID=Q7MUD8_PORGI
Uncharacterized protein {ECO:0000313|EMBL:KKB45121.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
hypothetical protein; K07504 hypothetical protein
Displaying items 1-30 of 82 in total

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