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SCNpilot_bf_inoc_scaffold_404_curated_17

Organism: scnpilot_dereplicated_Bacteroidales_1

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 2 ASCG 13 / 38
Location: 16501..17052

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4B1_PALPW similarity UNIREF
DB: UNIREF100
  • Identity: 69.6
  • Coverage: 181.0
  • Bit_score: 260
  • Evalue 9.60e-67
RNA polymerase, sigma-24 subunit, ecf subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 69.6
  • Coverage: 181.0
  • Bit_score: 260
  • Evalue 3.00e-67
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADQ79555.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.6
  • Coverage: 181.0
  • Bit_score: 260
  • Evalue 1.30e-66

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Taxonomy

Paludibacter propionicigenes → Paludibacter → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 552
ATGTCAAATAAAAAAGAAGAAACAGAGATTATTCAGGGGCTTAGCAATCCAAGCACACAAGCAAAGGCTTTTTCAGCTTGTGTGAGGATGTATCAAGAAAGGTTGTACTGGCATATTCGTAAAATGGTTTTATCGCATGAGGACGCCAATGATGTTCTTCAAAATACTTTTATGAAAGCATGGAATGGTATTAATAATTTCAGAGGTGATTCGCAAATTCTGACATGGTTATATAAAATTGCCACAAATGAAACTATGACATTTTTGGCAAATAAACGACTTAGAAATTTATCAGGCATAGAAGAGGTTGAAAATCTTTTATTAAATCAACTTAGAAGTGATGAGTATTTTTCGGGTGCAGAAGCAGAAATGAAACTTCAGGAAGCAATTCTGACTTTGCCGGAAAAACAAAGATTAGTTTTCAATATGAAGTATTTCGATAATATAACATATGAGCAAATGGAAGAAATCCTGAATACTTCAGTTGGAGCTTTGAAGGCATCTTATCATCATGCCACAAAGAAAATCGAGAAATTTTTAACTGATAGTTAA
PROTEIN sequence
Length: 184
MSNKKEETEIIQGLSNPSTQAKAFSACVRMYQERLYWHIRKMVLSHEDANDVLQNTFMKAWNGINNFRGDSQILTWLYKIATNETMTFLANKRLRNLSGIEEVENLLLNQLRSDEYFSGAEAEMKLQEAILTLPEKQRLVFNMKYFDNITYEQMEEILNTSVGALKASYHHATKKIEKFLTDS*