ggKbase home page

SCNpilot_bf_inoc_scaffold_404_curated_20

Organism: scnpilot_dereplicated_Bacteroidales_1

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 2 ASCG 13 / 38
Location: comp(18252..18620)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding helix-turn-helix protein n=1 Tax=Paraprevotella xylaniphila YIT 11841 RepID=F3QW72_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 55.8
  • Coverage: 120.0
  • Bit_score: 140
  • Evalue 1.30e-30
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EGG52260.1}; TaxID=762982 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella xylaniphila YIT 11841.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.8
  • Coverage: 120.0
  • Bit_score: 140
  • Evalue 1.80e-30
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 51.2
  • Coverage: 121.0
  • Bit_score: 132
  • Evalue 1.10e-28

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Paraprevotella xylaniphila → Paraprevotella → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 369
ATGAAACTAATAGCTAATAAAATAGAATATGAGGCTATCATGGCAAGGGTTAACGAACTTATTGAACTTGTTGATGATAACACTCCAAAGAATGATAAAAATTATATTGAATTAGATATTCTCACAGATTTAGTTGTCGCATACGAAAAAACACATTATTCGATAGGTAAACCTGCTTTAAGTGATGTGATTAAAACACGTATGAATGAAATGAATTTAACCCAAAAGTCATTGGCTGACATGCTTGGAATTAGTGCTCCACGTATTAATGAATATCTTAATGGTAAATCACTTCCTACCTTGCAGGTAGCTCGAAAAATTCATAAAAAACTGAATATTGATGCCAATGTTATTCTTGGAGCAATTTAA
PROTEIN sequence
Length: 123
MKLIANKIEYEAIMARVNELIELVDDNTPKNDKNYIELDILTDLVVAYEKTHYSIGKPALSDVIKTRMNEMNLTQKSLADMLGISAPRINEYLNGKSLPTLQVARKIHKKLNIDANVILGAI*