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SCNpilot_bf_inoc_scaffold_1125_curated_15

Organism: scnpilot_dereplicated_Bacteroidales_1

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 2 ASCG 13 / 38
Location: comp(18852..19424)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, expansion family 1 n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K5ZE71_9PORP similarity UNIREF
DB: UNIREF100
  • Identity: 63.7
  • Coverage: 190.0
  • Bit_score: 252
  • Evalue 4.60e-64
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EKN09515.1}; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii CL02T12C30.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.7
  • Coverage: 190.0
  • Bit_score: 252
  • Evalue 6.50e-64
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 61.5
  • Coverage: 187.0
  • Bit_score: 240
  • Evalue 4.40e-61

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Taxonomy

Parabacteroides goldsteinii → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 573
ATGGCCGCCTATACTTCACGAAATACGGATGAAGAACTCTATCAACTAATACAAAAAGGTGTTGAGAAAGCCTTTGACACTTTTTTTCTGCGACATTATCCGGCATTATGTAGCTATGCCAATCAATTTGTTGAGAGGGAAGATGCAGAAGAGATTGCTCAGGAAATTATGATTTGGTTCTGGGAAAACCGGACTATGCCTGTGTGGGAAACTTCCCTGATAAGCTACTTATTCAAAGCCGTAAAAAACAGATGTATAACTTTAATAAATAGGAATGATCTCAAACAACGTATCCTTCAGACTTTGTACGAAGGAGATGATCATCTCTTTGATGATCCCGACTTCTATGTAGTTGAGGAACTCTCTCAGAAAATTCAATCAGCATTAGAGGCTTTACCTTCAAATTATCGGGAGGCATTCGAAATGAACCGCTTTCAAAAGTTTACATATAAAGAAATTGCTTCGCAACTTAATGTTTCATCCAAAACTGTGGATTATAGAATCCAGCAAGCATTGAAACAATTACGTATTGATCTGAAAGACTATTTACCGCTAATCCTTTTTTTATCCTGA
PROTEIN sequence
Length: 191
MAAYTSRNTDEELYQLIQKGVEKAFDTFFLRHYPALCSYANQFVEREDAEEIAQEIMIWFWENRTMPVWETSLISYLFKAVKNRCITLINRNDLKQRILQTLYEGDDHLFDDPDFYVVEELSQKIQSALEALPSNYREAFEMNRFQKFTYKEIASQLNVSSKTVDYRIQQALKQLRIDLKDYLPLILFLS*