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SCNpilot_bf_inoc_scaffold_1125_curated

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_1125_curated_1
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1..390)
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Marinilabilia salmonicolor RepID=UPI00029A1CDA
Uncharacterized protein {ECO:0000313|EMBL:GAO30301.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1125_curated_2
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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517..1032
DNA (516bp) protein (172aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X4F4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05200.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1125_curated_3
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1063..3783
DNA (2721bp) protein (907aa)
Uncharacterized protein n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K5ZQU3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN13700.1}; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii CL02T12C30.;"
acylaminoacyl-peptidase
SCNpilot_bf_inoc_scaffold_1125_curated_4
Bacteroides graminisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4073..4843
DNA (771bp) protein (257aa)
Ferredoxin n=1 Tax=Bacteroides faecis CAG:32 RepID=R6UVC3_9BACE
Ferredoxin {ECO:0000313|EMBL:GAK37345.1}; TaxID=1121097 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides graminisolvens DSM 19988 = JCM 15093.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1125_curated_5
Draconibacterium orientale, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5081..5824)
DNA (744bp) protein (248aa)
Response regulator {ECO:0000313|EMBL:AHW61185.1}; TaxID=1168034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium orientale.;"
LytTR family two component transcriptional regulator id=1872052 bin=GWD2_Bacteroidetes_40_43 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
LytTR family two component transcriptional regulator; K02477 two-component system, LytT family, response regulator
SCNpilot_bf_inoc_scaffold_1125_curated_6
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(5827..7746)
DNA (1920bp) protein (640aa)
Tetratricopeptide TPR_2 id=1928765 bin=GWD2_Bacteroidetes_33_33 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152
signal transduction histidine kinase LytS
Tax=GWD2_Bacteroidetes_33_33_curated
SCNpilot_bf_inoc_scaffold_1125_curated_7
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7879..8811)
DNA (933bp) protein (311aa)
Antioxidant, AhpC/TSA family {ECO:0000313|EMBL:EEU50747.1}; EC=1.11.1.15 {ECO:0000313|EMBL:EEU50747.1};; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
Antioxidant AhpC/TSA family n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IIU8_9PORP
hypothetical protein
SCNpilot_bf_inoc_scaffold_1125_curated_8
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8939..10996)
DNA (2058bp) protein (686aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZG09_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21119.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
SCNpilot_bf_inoc_scaffold_1125_curated_9
Bacteroides intestinalis CAG:315, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(11020..11901)
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Bacteroides intestinalis CAG:315 RepID=R7DZV0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD94792.1}; TaxID=1263048 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides intestinalis CAG:315.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1125_curated_10
unknown

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comp(11989..13218)
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Bacteroides intestinalis CAG:315 RepID=R7DW36_9BACE
SCNpilot_bf_inoc_scaffold_1125_curated_11
Bacteroides salanitronis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(13262..14716)
DNA (1455bp) protein (485aa)
Uncharacterized protein n=1 Tax=Bacteroides salanitronis (strain DSM 18170 / JCM 13567 / BL78) RepID=F0R0N7_BACSH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY36241.1}; Flags: Precursor;; TaxID=667015 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salanitronis (strain DSM 18170 / JCM 13567 / BL78).;"
SCNpilot_bf_inoc_scaffold_1125_curated_12
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(14728..15288)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus ATCC 8483 RepID=A7LUQ1_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EDO12736.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1125_curated_13
Bacteroides salyersiae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(16110..17954)
DNA (1845bp) protein (615aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_0016
glucosamine--fructose-6-phosphate aminotransferase; K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] rbh
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=3 Tax=Bacteroides RepID=I9T0A8_9BACE
SCNpilot_bf_inoc_scaffold_1125_curated_14
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18033..18839)
DNA (807bp) protein (269aa)
Putative uncharacterized protein n=2 Tax=Dysgonomonas RepID=F8X425_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05071.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
Co/Zn/Cd efflux system protein
SCNpilot_bf_inoc_scaffold_1125_curated_15
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18852..19424)
DNA (573bp) protein (191aa)
RNA polymerase sigma-70 factor, expansion family 1 n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K5ZE71_9PORP
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EKN09515.1}; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii CL02T12C30.;"
RNA polymerase ECF-type sigma factor
SCNpilot_bf_inoc_scaffold_1125_curated_16
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19557..20558
DNA (1002bp) protein (334aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2AUY0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB55620.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
putative anti-sigma factor
SCNpilot_bf_inoc_scaffold_1125_curated_17
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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20732..23335
DNA (2604bp) protein (868aa)
TonB-dependent receptor {ECO:0000313|EMBL:CEA15973.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
SusC/RagA family TonB-linked outer membrane protein id=1934070 bin=GWD2_Bacteroidales_45_23 species=Bacteroides fragilis genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
TonB-dependent receptor plug
Displaying 17 items

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