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SCNpilot_bf_inoc_scaffold_908_curated_13

Organism: scnpilot_dereplicated_Bacteroidales_1

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 2 ASCG 13 / 38
Location: comp(11162..11431)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S18 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0A2_PALPW similarity UNIREF
DB: UNIREF100
  • Identity: 88.8
  • Coverage: 89.0
  • Bit_score: 169
  • Evalue 1.90e-39
SSU ribosomal protein s18p; K02963 small subunit ribosomal protein S18 similarity KEGG
DB: KEGG
  • Identity: 88.8
  • Coverage: 89.0
  • Bit_score: 169
  • Evalue 5.80e-40
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.8
  • Coverage: 89.0
  • Bit_score: 169
  • Evalue 2.60e-39

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Taxonomy

Paludibacter propionicigenes → Paludibacter → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 270
ATGGCATCAAATCAAGGAGATATAAGATATTTAACACCACCAACAGTGGATCTTTCAAGAAAGAAATATTGTCGTTTCAAAAAGAGCGGAATCAAATATATTGATTATAAAGATCCTGAATTTTTGAAGAAATTTTTAAATGAACAAGGTAAAATTTTGCCTCGTCGCCTGACAGGTACTTCATTAAAGTTCCAACGTCAGGTAGCTCAGGCAGTGAAGAGAGCTCGTCATTTAGCTTTACTTCCTTACGTAACCGATATGTTGAAATAA
PROTEIN sequence
Length: 90
MASNQGDIRYLTPPTVDLSRKKYCRFKKSGIKYIDYKDPEFLKKFLNEQGKILPRRLTGTSLKFQRQVAQAVKRARHLALLPYVTDMLK*