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SCNpilot_bf_inoc_scaffold_199_curated_30

Organism: scnpilot_dereplicated_Bacteroidales_1

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 2 ASCG 13 / 38
Location: comp(38918..39781)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 70 subunit, RpoD subfamily n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3A0_PALPW similarity UNIREF
DB: UNIREF100
  • Identity: 92.7
  • Coverage: 287.0
  • Bit_score: 515
  • Evalue 3.40e-143
RNA polymerase, sigma 70 subunit, rpod subfamily; K03086 RNA polymerase primary sigma factor similarity KEGG
DB: KEGG
  • Identity: 92.7
  • Coverage: 287.0
  • Bit_score: 515
  • Evalue 1.10e-143
Tax=CG_Paludi_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 93.4
  • Coverage: 288.0
  • Bit_score: 520
  • Evalue 1.10e-144

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Taxonomy

CG_Paludi_01 → Paludibacter → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 864
ATGAGACAACTAAAAATTACTAAATCGATAACAAATAGAGAGAGTGCCTCTTTAGATAAGTATCTTCAGGAAATAGGAAGAGAAGATCTTATTACAGTAGAAGAAGAGGTGGAACTTGCCCAACGAATCAGAAACGGCGATAGACTTGCCTTAGAAAAACTGACTCGTGCTAATCTCCGTTTCGTTGTTTCAGTTGCTAAACAATATCAAAATCAAGGTTTGAGTTTACCCGACTTAATTAATGAGGGTAATTTAGGCTTAATTAAAGCTGCGGAAAAGTTTGATGAAACTCGCGGATTTAAATTTATCTCCTATGCTGTGTGGTGGATTCGACAATCAATTTTGCAAGCATTGGCAGAGCAATCACGTATTGTACGTCTTCCATTGAATCAGGTAGGGTCTTTGAATAAAATCAACAAAGCTTTTTCTAAGTTTGAGCAAGAAAACGAAAGAAGACCTTCAGCAGAGGAACTTGCCGAAAAACTTGATATTCCTGTAGAGAAAATTGCAGATACAATGAAAGTGTCGGGTAGACATATATCTGTAGATGCTCCATTTGTTGAGGGAGAAGATAACAGCTTGTTAGATGTTATGGTGAATGATGATTCTCCTAATGCCGACAGAGCACTGATTAACGAATCATTATCGACCGAAATCGAGAGGGTTTTAATTCATGCTTTATCTGAAAGAGAACGAGATATAGTGAAGAAATTCTTCGGACTTGGCGTCCCTGAAATGACTTTGGAAGAAATAGGCGATGAGTTTGGATTAACACGAGAACGTGTACGTCAAATTAAAGAAAAAGCCATTCGAAAGTTAAAACCACATTCAAGAAGTAAACTACTAAAAAGTTTTTTAGGATAA
PROTEIN sequence
Length: 288
MRQLKITKSITNRESASLDKYLQEIGREDLITVEEEVELAQRIRNGDRLALEKLTRANLRFVVSVAKQYQNQGLSLPDLINEGNLGLIKAAEKFDETRGFKFISYAVWWIRQSILQALAEQSRIVRLPLNQVGSLNKINKAFSKFEQENERRPSAEELAEKLDIPVEKIADTMKVSGRHISVDAPFVEGEDNSLLDVMVNDDSPNADRALINESLSTEIERVLIHALSERERDIVKKFFGLGVPEMTLEEIGDEFGLTRERVRQIKEKAIRKLKPHSRSKLLKSFLG*