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SCNpilot_bf_inoc_scaffold_114_curated_111

Organism: scnpilot_dereplicated_Bacteroidales_1

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 2 ASCG 13 / 38
Location: comp(132770..133270)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1J2_PALPW similarity UNIREF
DB: UNIREF100
  • Identity: 63.9
  • Coverage: 166.0
  • Bit_score: 225
  • Evalue 5.30e-56
RNA polymerase, sigma-24 subunit, ecf subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 63.9
  • Coverage: 166.0
  • Bit_score: 225
  • Evalue 1.70e-56
Tax=CG_Paludi_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 65.7
  • Coverage: 166.0
  • Bit_score: 227
  • Evalue 1.10e-56

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Taxonomy

CG_Paludi_01 → Paludibacter → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 501
ATGTTGAATACACACTTAGAAAATGAGCTTCTATCTTTACAAACTAACATGAGAAATTATGCCTCTCTACTTACTATGGGTCGTGAAGAGGCTGAAGATTTACTTCAAGAAACTAACTTGAAAGTAATAGATAATTGTGATAAGTTTATAGAGAATAATAATTTTAATGGATGGGTTTTTACTATAATGAAAAACATTTTCATAAATAATTATCGCGCTATATTACGCAATAAGATTGTTTTTGATAAATCCAATGATTTATATTATCTCAATTTATGTCAGAATTCAGGGTTTTATAGTCCGGAAGGTTCTTATTTTGTTGGAGAAATTAATGATTACATAAATTCATTTTTAGATGAGTATAGAATAACATTTTCTATGTATGTTCAAGGTTATAAATATAAGGAGATTTCAGAAATCATGCACATACCAATTGGCACAGTGAAAAGTCGTATTTATATAACACGAAAACATCTTCAGAAGAAATTAAAAGATTTTTAA
PROTEIN sequence
Length: 167
MLNTHLENELLSLQTNMRNYASLLTMGREEAEDLLQETNLKVIDNCDKFIENNNFNGWVFTIMKNIFINNYRAILRNKIVFDKSNDLYYLNLCQNSGFYSPEGSYFVGEINDYINSFLDEYRITFSMYVQGYKYKEISEIMHIPIGTVKSRIYITRKHLQKKLKDF*