ggKbase home page

SCNpilot_bf_inoc_scaffold_529_curated_20

Organism: scnpilot_dereplicated_Bacteroidales_1

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 2 ASCG 13 / 38
Location: comp(22027..22302)

Top 3 Functional Annotations

Value Algorithm Source
Histone family protein DNA-binding protein id=4090887 bin=GWF2_Bacteroidetes_33_16 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 86.7
  • Coverage: 90.0
  • Bit_score: 159
  • Evalue 1.50e-36
histone family protein DNA-binding protein; K03530 DNA-binding protein HU-beta similarity KEGG
DB: KEGG
  • Identity: 84.4
  • Coverage: 90.0
  • Bit_score: 158
  • Evalue 1.40e-36
Histone family protein DNA-binding protein {ECO:0000313|EMBL:ADQ78419.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.4
  • Coverage: 90.0
  • Bit_score: 158
  • Evalue 6.10e-36

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Paludibacter propionicigenes → Paludibacter → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 276
ATGACAAAGGCAGATATCGTTAACGAAATTGCTAAGAATACGGGTATAGATAAAGTATCTGTGTTAGCAACTGTTGAGGCTTTTATGGACACTATCAAGGATTCACTTGCTAAAAAGGAAAATGTTTATTTAAGAGGTTTTGGAAGCTTTATAGTAAAAGAAAGAGCTCAGAAAACGGCAAGAAATATTTCAAAGAATACAACTATAATAATTCCTGCCCACAGCATACCTTCATTTAAGCCTTCAAAAACTTTTGTTAATGAAGTTAAGAAATAA
PROTEIN sequence
Length: 92
MTKADIVNEIAKNTGIDKVSVLATVEAFMDTIKDSLAKKENVYLRGFGSFIVKERAQKTARNISKNTTIIIPAHSIPSFKPSKTFVNEVKK*