ggKbase home page

SCNpilot_bf_inoc_scaffold_1191_curated_15

Organism: scnpilot_dereplicated_Bacteroidales_1

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 2 ASCG 13 / 38
Location: comp(12460..13611)

Top 3 Functional Annotations

Value Algorithm Source
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.2
  • Coverage: 383.0
  • Bit_score: 629
  • Evalue 2.30e-177
GDP-D-mannose dehydratase; K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47] similarity KEGG
DB: KEGG
  • Identity: 77.8
  • Coverage: 383.0
  • Bit_score: 623
  • Evalue 4.80e-176
GDP-mannose 4,6-dehydratase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y924_9PORP similarity UNIREF
DB: UNIREF100
  • Identity: 79.6
  • Coverage: 383.0
  • Bit_score: 625
  • Evalue 4.00e-176

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Parabacteroides gordonii → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1152
ATGAGCAAAGTAGCTTTAATTACCGGTATAACCGGACAAGATGGTGCCTATCTGGCAGAGTATTTAATTAAACTAGGATATAAGGTGCACGGGATCAAACGCCGTGCATCTCAATTTAATACGGATCGTATTGATCATTTGTATCAAGGTCCGCACGAAGAATACAGAAACCTTATCCTTCATTATGGAGACCTTACGGATTCCATGAATATCACCCGTATCATACAGGAGGTGCAACCGGACGAGATATATAATCTGGCAGCCATGAGCCACGTAAAGGTGAGCTTCGATACGCCGGAATATACCGCCAATGCCGACGGACTGGGTACTTTGCGAATTCTGGAAGCCGTTCGCTTATTGGGACTTACCCAAAAGACGCGTATCTACCAGGCCTCTACTTCCGAATTATATGGTCTGGTGCAGGAAATTCCACAAAAGGAGACTACCCCGTTTTATCCCCGCTCGCCCTATGCGGTGGCTAAGATGTATGCCTACTGGATTACGGTTAACTACCGCGAGGCTTACAATATGCACGCCAGCAACGGTATCCTGTTCAACCACGAGTCGCCATTGCGCGGCGAGACCTTCGTTACACGCAAGATTACACGTGCGGTGAGCAAGATTGCACTGGATATGCAGCACGAGTTGTACCTGGGTAACCTTTCGTCGCAACGTGACTGGGGTCATGCCAAGGATTATGTGCGTGCCATGCATCTTATCCTGCAGCAGGACAAGCCTTCGGATTATGTGATTGCCACCGGTGTAACCACCACCGTACGCGATTTTGTACGCATGGCTTTTGCCGAGGTAGGCATCACTGTTGCATTCAGCGGCGAAGGAGTAGACGAGGTAGGTGTTGTTACGGCAATCGATCAGGCTCGCTTTGTGGAAAGTGTGGGCGAATCGTACCTTGCCAAGGCATTGGAGCTGATGGACAAGACGGTGGTAAAGGTAGACCCGGCCTATTTCCGTCCCACAGAAGTGGAGCTGCTTATCGGAGATCCTACCAAATCGAAGACTGTATTGGGCTGGGAGCCTAAATACGACCTCAAAGGGTTGGTGGAAGATATGATGCGTAGCGATGTGAAGGGCATGAAGAAGGATTCATATCTGAAAGAGGGCGGTTACCGTACCTTAAATTACTTTGAGTAA
PROTEIN sequence
Length: 384
MSKVALITGITGQDGAYLAEYLIKLGYKVHGIKRRASQFNTDRIDHLYQGPHEEYRNLILHYGDLTDSMNITRIIQEVQPDEIYNLAAMSHVKVSFDTPEYTANADGLGTLRILEAVRLLGLTQKTRIYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKMYAYWITVNYREAYNMHASNGILFNHESPLRGETFVTRKITRAVSKIALDMQHELYLGNLSSQRDWGHAKDYVRAMHLILQQDKPSDYVIATGVTTTVRDFVRMAFAEVGITVAFSGEGVDEVGVVTAIDQARFVESVGESYLAKALELMDKTVVKVDPAYFRPTEVELLIGDPTKSKTVLGWEPKYDLKGLVEDMMRSDVKGMKKDSYLKEGGYRTLNYFE*