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SCNpilot_bf_inoc_scaffold_1191_curated

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_1191_curated_1
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2..508)
DNA (507bp) protein (169aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6A0N5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN27998.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
nucleoside-diphosphate sugar epimerase/dehydrase
SCNpilot_bf_inoc_scaffold_1191_curated_2
unknown

Not on your lists

705..965
DNA (261bp) protein (87aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1191_curated_3
Bacteroides nordii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(916..1881)
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Bacteroides nordii CL02T12C05 RepID=I9RTZ9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY46556.1}; TaxID=997884 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides nordii CL02T12C05.;"
UndPP-QuiNAc-P-transferase rbh
SCNpilot_bf_inoc_scaffold_1191_curated_4
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1884..2831)
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XCN1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14096.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
NAD-dependent epimerase/dehydratase
SCNpilot_bf_inoc_scaffold_1191_curated_5
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

comp(3150..3566)
DNA (417bp) protein (139aa)
Uncharacterized protein n=2 Tax=Porphyromonas gingivalis RepID=U2JR55_PORGN
protein export chaperone secb
Tax=CG_Bacteroid_01
SCNpilot_bf_inoc_scaffold_1191_curated_6
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3578..3985)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus ATCC 8483 RepID=A7M1H2_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EDO10507.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
SCNpilot_bf_inoc_scaffold_1191_curated_7
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3982..4383)
DNA (402bp) protein (134aa)
Uncharacterized protein n=2 Tax=Bacteroides dorei RepID=I8WHY8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY38225.1}; TaxID=997876 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei CL02T12C06.;"
SCNpilot_bf_inoc_scaffold_1191_curated_8
unknown

Not on your lists

comp(4439..4573)
DNA (135bp) protein (45aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1191_curated_9
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4602..5453)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RWY1_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU18996.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1191_curated_10
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5494..7479)
DNA (1986bp) protein (662aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
hypothetical protein; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
UvrD/REP helicase n=2 Tax=Bacteroidetes RepID=F3XUQ1_9FLAO
SCNpilot_bf_inoc_scaffold_1191_curated_11
Flavobacterium psychrophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7461..9596)
DNA (2136bp) protein (712aa)
Predicted ATP-dependent endonuclease of the OLD family n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6GZV7_FLAPJ
hypothetical protein
Predicted ATP-dependent endonuclease of the OLD family {ECO:0000313|EMBL:CAL43630.1}; TaxID=402612 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511).;"
SCNpilot_bf_inoc_scaffold_1191_curated_12
Bacteroides sp. CAG:633, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9748..10185)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:633 RepID=R6FP65_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB10781.1}; TaxID=1262744 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:633.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1191_curated_13
unknown

Not on your lists

10229..10435
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1191_curated_14
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10351..11415)
DNA (1065bp) protein (355aa)
mannose-1-phosphate guanylyltransferase; K00971 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
Putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D1T1_BACPM
Putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase {ECO:0000313|EMBL:EDY94524.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
SCNpilot_bf_inoc_scaffold_1191_curated_15
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12460..13611)
DNA (1152bp) protein (384aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
GDP-D-mannose dehydratase; K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47]
GDP-mannose 4,6-dehydratase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y924_9PORP
SCNpilot_bf_inoc_scaffold_1191_curated_16
Bacteroides sp. 2_2_4, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13828..14562)
DNA (735bp) protein (245aa)
Glycosyltransferase, WecB/TagA/CpsF family {ECO:0000313|EMBL:EEO57904.1}; EC=2.4.1.- {ECO:0000313|EMBL:EEO57904.1};; TaxID=469590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_2_4.;"
WecB/TagA/CpsF family glycosyl transferase; K05946 N-acetylglucosaminyldiphosphoundecaprenol [EC:2.4.1.187]
Glycosyltransferase, WecB/TagA/CpsF family n=1 Tax=Bacteroides sp. 2_2_4 RepID=C3R120_9BACE
SCNpilot_bf_inoc_scaffold_1191_curated_17
unknown

Not on your lists

comp(14832..15002)
DNA (171bp) protein (57aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1191_curated_18
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15582..16142)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E4M7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KJR97818.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium BRH_c16a.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1191_curated_19
Bacteroides salyersiae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16184..17110)
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003774F96
Uncharacterized protein {ECO:0000313|EMBL:EIY57084.1}; TaxID=997887 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salyersiae CL02T12C01.;"
putative glycosyltransferase
SCNpilot_bf_inoc_scaffold_1191_curated_20
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17174..18043)
DNA (870bp) protein (290aa)
Putative acetylglucosaminyltransferase n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GS98_9SPHI
Putative acetylglucosaminyltransferase {ECO:0000313|EMBL:EOR94568.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
family 2 glycosyl transferase
SCNpilot_bf_inoc_scaffold_1191_curated_21
Bacteroides sp. 3_1_33FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18043..19272)
DNA (1230bp) protein (410aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C3PVE0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEZ22213.1}; TaxID=457391 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_33FAA.;"
SCNpilot_bf_inoc_scaffold_1191_curated_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19306..20415)
DNA (1110bp) protein (370aa)
yveP; glycosyl transferase group 1 (EC:2.4.-.-)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I8X2V0_BACFG
Glycosyl transferases group 1 family protein {ECO:0000313|EMBL:EYE46923.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
SCNpilot_bf_inoc_scaffold_1191_curated_23
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20422..21570)
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9HVQ2_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EOS07926.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
glycosyl transferase family protein
SCNpilot_bf_inoc_scaffold_1191_curated_24
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21572..22318)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GQU4_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EOR94078.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1191_curated_25
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22299..23627)
DNA (1329bp) protein (443aa)
O-antigen flippase Wzx id=2123364 bin=GWE2_Bacteroidetes_41_25 species=Flavobacterium frigoris genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_41_25 organism_group=Bacteroidetes organism_desc=Good
polysaccharide biosynthesis protein
Tax=GWA2_Bacteroidetes_40_15_curated
SCNpilot_bf_inoc_scaffold_1191_curated_26
Bacteroides intestinalis CAG:315, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23679..24989)
DNA (1311bp) protein (437aa)
UDP-glucose dehydrogenase; K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] rbh
Uncharacterized protein n=1 Tax=Bacteroides intestinalis CAG:315 RepID=R7DVN1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD94103.1}; TaxID=1263048 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides intestinalis CAG:315.;"
SCNpilot_bf_inoc_scaffold_1191_curated_27
Bacteroides nordii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25005..25553)
DNA (549bp) protein (183aa)
dtdp-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13); K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Bacteroides nordii CL02T12C05 RepID=I9GHD3_9BACE
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:EIY46094.1}; TaxID=997884 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides nordii CL02T12C05.;"
SCNpilot_bf_inoc_scaffold_1191_curated_28
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25550..26425)
DNA (876bp) protein (292aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24); K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
Glucose-1-phosphate thymidylyltransferase n=3 Tax=Parabacteroides RepID=A7AAV9_9PORP
SCNpilot_bf_inoc_scaffold_1191_curated_29
unknown

Not on your lists

comp(26969..27235)
DNA (267bp) protein (89aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1191_curated_30
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27248..27700)
DNA (453bp) protein (151aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K5YXX3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB58435.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
glycoside hydrolase; K02395 flagellar protein FlgJ
Displaying items 1-30 of 50 in total

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