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SCNpilot_bf_inoc_scaffold_1191_curated_46

Organism: scnpilot_dereplicated_Bacteroidales_1

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 2 ASCG 13 / 38
Location: comp(53394..53996)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, expansion family 1 n=2 Tax=Parabacteroides RepID=N2APN4_9PORP similarity UNIREF
DB: UNIREF100
  • Identity: 57.9
  • Coverage: 178.0
  • Bit_score: 209
  • Evalue 2.80e-51
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EOS19583.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.9
  • Coverage: 178.0
  • Bit_score: 209
  • Evalue 3.90e-51
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 33.2
  • Coverage: 193.0
  • Bit_score: 124
  • Evalue 2.80e-26

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Taxonomy

Parabacteroides goldsteinii → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 603
ATGATAAGTCCCTTGGAAGATGAAAAAAACCAATCAGCTCTTTTGCAGCAAGTAGCTTTGGGCAACAATGCAGCATTCAGGCAACTCTTTGATAGTTATTATCAAAGACTCTATCATGTAGCCCTGTATTTCTTAAAGAACAAGGAACTAGCCGAAGAAGCTGTTGCAGATGTATTTTATAATGTATGGCGAAAAAAAGAAAATCTCGCTTCAGTTGCAGATATAAGCAATTACCTTTATAAATCCGTAAAAAACCAGTCACTCCACTACATACGTCGTACGCGTGATGCTGACGAATCCATTGAACTTTATAATATTGAGCTGATAGCGGATAACGACAATCCTGAAACATCCATCGAAAACAAAGAATATCAGCATCTGCTTCAACAAGCGATAAATAATTTACCGCCTAAATGCCGTGAAGTATTTCGTCTTGTATTGTCAGATAAGCTCACCCATAAACAAATTGCCCAACTTTTGGACATTTCAGAAAAAACAGTGGAAGCCCACGTTGCAAATGCCTACAATAAGATACCAGGTCTGGTTAAGAGCAAGTATAAGGAAACTGATTCGAAAAATAAGATTATGTTCGTGTTCATTTAA
PROTEIN sequence
Length: 201
MISPLEDEKNQSALLQQVALGNNAAFRQLFDSYYQRLYHVALYFLKNKELAEEAVADVFYNVWRKKENLASVADISNYLYKSVKNQSLHYIRRTRDADESIELYNIELIADNDNPETSIENKEYQHLLQQAINNLPPKCREVFRLVLSDKLTHKQIAQLLDISEKTVEAHVANAYNKIPGLVKSKYKETDSKNKIMFVFI*