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SCNpilot_bf_inoc_scaffold_233_curated_29

Organism: scnpilot_dereplicated_Bacteroidales_1

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 2 ASCG 13 / 38
Location: comp(40878..43019)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.3
  • Coverage: 712.0
  • Bit_score: 1135
  • Evalue 0.0
RNAse r (EC:3.1.-.-); K12573 ribonuclease R [EC:3.1.-.-] similarity KEGG
DB: KEGG
  • Identity: 75.3
  • Coverage: 712.0
  • Bit_score: 1135
  • Evalue 0.0
Ribonuclease R n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T775_PALPW similarity UNIREF
DB: UNIREF100
  • Identity: 75.3
  • Coverage: 712.0
  • Bit_score: 1135
  • Evalue 0.0

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Taxonomy

Paludibacter propionicigenes → Paludibacter → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 2142
ATGAGCAAAAAAAGAAAGAAAACTAATAGTACACGTATTAGGAAATCAGAGCTTATTCAACTTATCGTAAATGTTTTTACAGATAACCCTGAAAAGACATATAATTATCGTCAGGTAGCTAAAATATTAGACATAAATAATGATTCTCAGGGTGAATTTATTCATGAATTAATATATCAGCTTTGTGATGATGACTTTTTAAAAGAAGTTTCTCGTGGAAAATTCAAACTGAACTCACGTGGTGGATATATTACAGGTACTATTGATCGTCAAGGTATTAAAACTTTTCTTATCCCTGATGATGATGGTGAACCTGTGTTTATTCCTGAAAGAAAGACCAACAACGCTTTACCGCATGATAAAGTAAAAGTGTTTTTATATGCTCGAAGAAGAGGGCAATTGCCCGAAGGTGAGGTTGTAGATATCATTCAAAGAGCTAAAGATACTTTTGTCGGCGTATTAGAAGTCTCTGATAATTTTGCTTTTCTTGTGTGTGATAACAGAGTTTTAGCTCAGGATGTATTTATCCCTAAAAATAAGCTTAACGGAGCAAAAAACGGTCAGAAAGTGATAGTAAAACTCTCAAAATGGGAGCCTAATCTGAAAAGTCCGGTTGGTGAAGTAATAGATGTCTTAGGCGAGAAAGGTAATAATGATACCGAGATGCATGCTATTCTTGCTGAGTTTGGCTTGCCATACAAATATCCTGAAAAGGTAGAGGAAGCTGCAAATAAAATTGAAGCCGGCATAACAAAGGAAGAAATTGCAAAACGTATTGATATGCGTGATGTTACAACTTTCACCATAGACCCAAAAGATGCTAAGGATTTTGATGATGCTTTGTCGGTTCGCAAGTTAGATAACGATTTATGGGAAGTTGGTGTACATATAGCAGACGTTACTCATTATGTGAGAAATGGTAGTATCATTGAAAAAGAAGCAAAGGAAAGAGCAACATCGGTTTACTTGGTTGACCGCACTATCCCCATGCTGCCTGAGCATATTTCCAATGGTATTTGTTCGCTACGCCCTAATGAAGACAAATTGACTTACTCGGTCGTTTTTCAGATGAATGAAGAAGCGGAAGTTAAGCATTATGAGATAGCTAAAACTGTAATCCATAGCAATAGAAGATTCACATACGAAGAAGCTCAGAATATTATTGAAACTCAAACCGGTGATTTTAAAGATGAAATACTTTTAATTGATAATCTTGCAAAGAAATTAAGAAAAAAGAGATTCGATAATGGAGCTATAGCATTTGACAGGGTAGAGGTTAAGTTTGAAGTTGATGAAAAAGGCAAACCGCTTTCAGTATATTTCAGGGAACAAAAGGACGCCAATAAACTGATAGAAGAGTTTATGCTTTTAGCCAATAAAACTGTTGCAACTCATATAGGTAAACCGGACAAGAAACAGAAAGCCAAGACTTTCATTTATCGTGTTCATGATGTGCCTGACATTAATAAACTTCAAAACTTTGCACAGTTTATCAGTAAATTTGGATATAAACTTAAAACTACCGGAAAACTTACGGATGTTTCCGGTGCTATAAATAAACTTTTAGATGACGCACAAGGTAAAAAGGAGCAAAATTTAATCGAGACACTTGCTGTAAGGTCTATGGCTAAAGCAATTTATACAACTGAAAATATCGGACATTATGGCTTGGCGTTCGACTATTATTCTCACTTTACTTCTCCCATTCGTAGATATCCCGACATGATGGCTCATCGTTTATTAGAGCGGTATTTATCAGGTGGTAAGAATGTTAATGCTCAGGATTATGAAGAGCTTTGCAAGCACAGTTCGGATATGGAACAGTTAGCTGCCAATGCGGAAAGGGCATCAGTCAAATACAAACAAGTTGAATTTATGGCTCAGTATGTAGGAGTCGTATTCGATGGAGTTATTTCAGGCATCACAGAATGGGGTATATATGTAGAACTGATTGAGAACAAATGCGAAGGAATGATTCCAATTCGCGACTTAGACGATGATTACTATATCTTTGACGATAAAAACTACTGTTTAGTCGGCAGGAGATATAATAAAAGATATCAATTGGGCGATGAAATCACAATTAAAGTTGCAAAAGCTAATTTAGATAAAAAGCAATTGGATTTTGTTTTGGCGGATTGA
PROTEIN sequence
Length: 714
MSKKRKKTNSTRIRKSELIQLIVNVFTDNPEKTYNYRQVAKILDINNDSQGEFIHELIYQLCDDDFLKEVSRGKFKLNSRGGYITGTIDRQGIKTFLIPDDDGEPVFIPERKTNNALPHDKVKVFLYARRRGQLPEGEVVDIIQRAKDTFVGVLEVSDNFAFLVCDNRVLAQDVFIPKNKLNGAKNGQKVIVKLSKWEPNLKSPVGEVIDVLGEKGNNDTEMHAILAEFGLPYKYPEKVEEAANKIEAGITKEEIAKRIDMRDVTTFTIDPKDAKDFDDALSVRKLDNDLWEVGVHIADVTHYVRNGSIIEKEAKERATSVYLVDRTIPMLPEHISNGICSLRPNEDKLTYSVVFQMNEEAEVKHYEIAKTVIHSNRRFTYEEAQNIIETQTGDFKDEILLIDNLAKKLRKKRFDNGAIAFDRVEVKFEVDEKGKPLSVYFREQKDANKLIEEFMLLANKTVATHIGKPDKKQKAKTFIYRVHDVPDINKLQNFAQFISKFGYKLKTTGKLTDVSGAINKLLDDAQGKKEQNLIETLAVRSMAKAIYTTENIGHYGLAFDYYSHFTSPIRRYPDMMAHRLLERYLSGGKNVNAQDYEELCKHSSDMEQLAANAERASVKYKQVEFMAQYVGVVFDGVISGITEWGIYVELIENKCEGMIPIRDLDDDYYIFDDKNYCLVGRRYNKRYQLGDEITIKVAKANLDKKQLDFVLAD*