ggKbase home page

SCNpilot_bf_inoc_scaffold_233_curated_62

Organism: scnpilot_dereplicated_Bacteroidales_1

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 2 ASCG 13 / 38
Location: 73970..74449

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor id=3343222 bin=GWF2_Bacteroidetes_42_66 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73 similarity UNIREF
DB: UNIREF100
  • Identity: 42.5
  • Coverage: 134.0
  • Bit_score: 101
  • Evalue 1.10e-18
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1 similarity KEGG
DB: KEGG
  • Identity: 36.8
  • Coverage: 125.0
  • Bit_score: 77
  • Evalue 4.10e-12
Tax=GWE2_Bacteroidetes_42_39_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 41.8
  • Coverage: 134.0
  • Bit_score: 99
  • Evalue 3.40e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWE2_Bacteroidetes_42_39_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 480
TTGAAAATAAACACAAACATAGATGAGCTTAATAGTGAGTTAAGAGCAGGATCTGAATATGCTTTTAAAACCTTATTCGGTCTAACCTATCCACGACTAATTTGTTATGCAAATATGTTTATGCAAGATAAAGAGCTTTCCAAAGATATCGTTCAGGATACCTTTGTGAAGTTTTGGGAAAAAAGGAAAAATCTTAAAGATTATCCTCCTGCTGAGCGTTTATTGTTTGTAATGCTGAAGAATAATTGCCTGAGATATTTACGAGATAATAAATTCTTTCGAACACAAGTTTCTATAGATCAGCATGAAATAGATGCTTTTGAAGAAGTTCAATCTTTGTTTGAGTTTGATTTTTTAGATGTGGAAAGTGGTATAATTGCGATAACCGATGCCGGCTTGTTGGTAACTAAAACAGTGACTTTTATGGCTTTTTTACTCATACAACCTGTTACAGTCTACTCAATATTCATCCTTTCGTAA
PROTEIN sequence
Length: 160
LKINTNIDELNSELRAGSEYAFKTLFGLTYPRLICYANMFMQDKELSKDIVQDTFVKFWEKRKNLKDYPPAERLLFVMLKNNCLRYLRDNKFFRTQVSIDQHEIDAFEEVQSLFEFDFLDVESGIIAITDAGLLVTKTVTFMAFLLIQPVTVYSIFILS*