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SCNpilot_bf_inoc_scaffold_233_curated_64

Organism: scnpilot_dereplicated_Bacteroidales_1

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 2 ASCG 13 / 38
Location: comp(75180..75527)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L19 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5L7_PALPW similarity UNIREF
DB: UNIREF100
  • Identity: 84.3
  • Coverage: 115.0
  • Bit_score: 194
  • Evalue 5.30e-47
LSU ribosomal protein l19p; K02884 large subunit ribosomal protein L19 similarity KEGG
DB: KEGG
  • Identity: 84.3
  • Coverage: 115.0
  • Bit_score: 194
  • Evalue 1.70e-47
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.3
  • Coverage: 115.0
  • Bit_score: 194
  • Evalue 7.50e-47

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Taxonomy

Paludibacter propionicigenes → Paludibacter → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 348
ATGGATTTAATAAAAGTTGCAGAGCAAGCGTTTTTGGTTGAAAACAACCATCCGGCATTCCGACCGGGAGATACAGTTACGGTTGCTTACAGAATTAAAGAAGGAAACAAAGAACGTATTCAGGAATTCCGTGGAGATGTTATAAAAATCTCAGGTCACCAAGGAAGCAAAAGATTTACAGTACGTAAAATGTCAGGTAATATAGGGGTAGAAAGAATTTTCCCTTTAGATTCACCATTTATCGACAAGATTACAGTGAACAAATTCGGTAAAGTACGCAGAGCTAAATTGTATTATTTACGTGCTCTAACCGGTAAGAAAGCAAAAATTAAAGAAAGAAGAGTATAA
PROTEIN sequence
Length: 116
MDLIKVAEQAFLVENNHPAFRPGDTVTVAYRIKEGNKERIQEFRGDVIKISGHQGSKRFTVRKMSGNIGVERIFPLDSPFIDKITVNKFGKVRRAKLYYLRALTGKKAKIKERRV*