ggKbase home page

SCNpilot_bf_inoc_scaffold_1039_curated

Search features with annotation key words

Displaying items 31-49 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_1039_curated_31
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20427..21722
DNA (1296bp) protein (432aa)
Fe-S oxidoreductase; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000374D6B6
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_1039_curated_32
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21719..22816
DNA (1098bp) protein (366aa)
Uncharacterized protein id=4595821 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_1039_curated_33
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22796..23662)
DNA (867bp) protein (289aa)
sucD; succinate-CoA ligase, alpha subunit (EC:6.2.1.-); K01902 succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
succinyl-CoA synthetase subsunit alpha n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036D2451
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_1039_curated_34
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23688..24821)
DNA (1134bp) protein (378aa)
sucC; succinate-CoA ligase, beta subunit (EC:6.2.1.-); K01903 succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
malate--CoA ligase subunit beta n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037B60AB
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_1039_curated_35
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24998..25606)
DNA (609bp) protein (203aa)
Transcriptional regulator, LuxR family id=4595836 bin=GWC2_Bacteroidetes_46_850 species=Bacteroidetes oral taxon 274 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
transcriptional regulator
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_1039_curated_36
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25603..26304)
DNA (702bp) protein (234aa)
Putative uncharacterized protein id=1885284 bin=GWD2_Bacteroidales_45_23 species=Alistipes indistinctus genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hemerythrin HHE cation binding domain-containing protein; K07322 regulator of cell morphogenesis and NO signaling
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_1039_curated_37
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26444..26974
DNA (531bp) protein (177aa)
Nitroreductase family protein id=1885282 bin=GWD2_Bacteroidales_45_23 species=gut metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
nitroreductase family protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_1039_curated_38
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27240..27473
DNA (234bp) protein (78aa)
photosystem I iron-sulfur center family protein; K00176 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
ferredoxin n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003615512
Uncharacterized protein {ECO:0000313|EMBL:EKN05896.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
SCNpilot_bf_inoc_scaffold_1039_curated_39
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27536..28618
DNA (1083bp) protein (361aa)
Ketoisovalerate oxidoreductase subunit VorB {ECO:0000313|EMBL:CEA15170.1}; EC=1.2.7.7 {ECO:0000313|EMBL:CEA15170.1};; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
2-ketoisovalerate ferredoxin reductase (EC:1.2.7.7); K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3]
2-ketoisovalerate ferredoxin reductase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037D5230
SCNpilot_bf_inoc_scaffold_1039_curated_40
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28797..29558
DNA (762bp) protein (254aa)
2-oxoglutarate oxidoreductase subunit beta; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3]
2-oxoglutarate oxidoreductase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000375E7AB
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_1039_curated_41
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29572..30129
DNA (558bp) protein (186aa)
ketoisovalerate oxidoreductase subunit vorA; K00177 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
2-oxoglutarate ferredoxin oxidoreductase subunit gamma n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036649D9
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_1039_curated_42
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30178..31446)
DNA (1269bp) protein (423aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035DA196
Dead/deah box helicase domain-containing protein {ECO:0000313|EMBL:CEA15174.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
dead/deah box helicase domain protein
SCNpilot_bf_inoc_scaffold_1039_curated_43
Bacteroides coprosuis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31828..32187
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Bacteroides coprosuis DSM 18011 RepID=F3ZRL8_9BACE
Transposase {ECO:0000313|EMBL:EGJ71141.1}; TaxID=679937 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprosuis DSM 18011.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1039_curated_44
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

32366..33163
DNA (798bp) protein (266aa)
Transposase IS204/IS1001/IS1096/IS1165 family protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8ECU8_RUNSL
transposase IS204/IS1001/IS1096/IS1165 family protein
Transposase IS204/IS1001/IS1096/IS1165 family protein {ECO:0000313|EMBL:AEI48156.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
SCNpilot_bf_inoc_scaffold_1039_curated_45
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33407..34171)
DNA (765bp) protein (255aa)
Metallophosphoesterase n=1 Tax=Bacteroides sp. 3_1_40A RepID=E5USD2_9BACE
Metallophosphoesterase {ECO:0000313|EMBL:EFV67935.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1039_curated_46
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34173..34952)
DNA (780bp) protein (260aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_40A RepID=E5USF0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFV67933.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1039_curated_47
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34946..35902)
DNA (957bp) protein (319aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_40A RepID=E5USF1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFV67934.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1039_curated_48
unknown

Not on your lists

36224..36379
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1039_curated_49
Jejuia pallidilutea, Jejuia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

36404..37201
DNA (798bp) protein (266aa)
Putative uncharacterized protein n=1 Tax=Clostridium sporogenes PA 3679 RepID=G9F502_CLOSG
Uncharacterized protein {ECO:0000313|EMBL:GAL73294.1}; TaxID=504487 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Jejuia.;" source="Jejuia pallidilutea.;"
hypothetical protein
Displaying items 31-49 of 49 in total

View Taxonomy