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SCNpilot_bf_inoc_scaffold_1444_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_1444_curated_1
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(137..1597)
DNA (1461bp) protein (487aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003669D6D
carbon starvation protein A rbh
Tax=GWE2_Bacteroidetes_42_39_curated
SCNpilot_bf_inoc_scaffold_1444_curated_2
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(1655..3298)
DNA (1644bp) protein (548aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000375E654
hypothetical protein
Tax=GWE2_Bacteroidetes_42_39_curated
SCNpilot_bf_inoc_scaffold_1444_curated_3
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3383..5092)
DNA (1710bp) protein (570aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003665386
Putative xanthan lyase {ECO:0000313|EMBL:BAR48125.1}; TaxID=1307832 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia 3313.;"
putative xanthan lyase
SCNpilot_bf_inoc_scaffold_1444_curated_4
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5108..6826)
DNA (1719bp) protein (573aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZIG6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:BAR48124.1}; TaxID=1307832 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia 3313.;"
RagB/SusD domain-containing protein
SCNpilot_bf_inoc_scaffold_1444_curated_5
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6845..10252)
DNA (3408bp) protein (1136aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZJ07_9PORP
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:BAR48123.1}; TaxID=1307832 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia 3313.;"
TonB-dependent receptor plug
SCNpilot_bf_inoc_scaffold_1444_curated_6
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(10380..11354)
DNA (975bp) protein (325aa)
Uncharacterized protein id=4484402 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
putative anti-sigma factor
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_1444_curated_7
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(11409..11624)
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000363423F
putative ECF-type RNA polymerase sigma factor
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_1444_curated_8
Bacteroides intestinalis CAG:315, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(11634..11945)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Bacteroides intestinalis CAG:315 RepID=R7DUS0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD93768.1}; TaxID=1263048 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides intestinalis CAG:315.;"
plasmid stabilization system
SCNpilot_bf_inoc_scaffold_1444_curated_9
Myroides profundi, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(11942..12178)
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000370127C
Uncharacterized protein {ECO:0000313|EMBL:AJH16757.1}; TaxID=480520 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides profundi.;"
SCNpilot_bf_inoc_scaffold_1444_curated_10
unknown

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12257..12361
DNA (105bp) protein (35aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1444_curated_11
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(12320..12901)
DNA (582bp) protein (194aa)
RNA polymerase sigma-70 factor, expansion family 1 id=1731439 bin=GWD2_Bacteroidales_45_23 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
Tax=GWC2_Bacteroidetes_46_850_curated
Displaying 11 items

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