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SCNpilot_bf_inoc_scaffold_711_curated

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_711_curated_1
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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703..1272
-----------------
DNA (570bp)
protein (190aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X305_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGJ99395.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_711_curated_2
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1279..2748
-----------------
DNA (1470bp)
protein (490aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5ITL2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGJ99396.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_711_curated_3
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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2813..4306
-----------------
DNA (1494bp)
protein (498aa)
Mfa1 fimbrilin id=1897906 bin=GWD2_Bacteroidales_45_23 species=Bacteroides coprosuis genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_711_curated_4
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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4404..5363
-----------------
DNA (960bp)
protein (320aa)
Putative uncharacterized protein id=4756178 bin=GWC2_Bacteroidetes_46_850 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_711_curated_5
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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5433..7187
-----------------
DNA (1755bp)
protein (585aa)
id=1897913 bin=GWD2_Bacteroidales_45_23 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_711_curated_6
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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7232..7693
-----------------
DNA (462bp)
protein (154aa)
Uncharacterized protein id=1897915 bin=GWD2_Bacteroidales_45_23 species=Bacteroides fragilis genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
AraC family transcriptional regulator
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_711_curated_7
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(7694..8158)
-----------------
DNA (465bp)
protein (155aa)
id=1822988 bin=GWD2_Bacteroidales_45_23 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_711_curated_8
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8572..9258)
-----------------
DNA (687bp)
protein (229aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036B4A6E
Uncharacterized protein {ECO:0000313|EMBL:CEA15200.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
peptidase m22 glycoprotease
SCNpilot_bf_inoc_scaffold_711_curated_9
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9427..9744)
-----------------
DNA (318bp)
protein (106aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000371A4D2
Uncharacterized protein {ECO:0000313|EMBL:CEA15199.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
RNA-binding protein
SCNpilot_bf_inoc_scaffold_711_curated_10
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(9991..12030)
-----------------
DNA (2040bp)
protein (680aa)
peptidyl-dipeptidase; K01284 peptidyl-dipeptidase Dcp [EC:3.4.15.5]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003617E0E
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_711_curated_11
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(12107..12541)
-----------------
DNA (435bp)
protein (145aa)
Putative uncharacterized protein id=2119756 bin=GWD2_Bacteroidales_45_23 species=Tannerella sp. 6_1_58FAA_CT1 genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein; K02426 cysteine desulfuration protein SufE
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_711_curated_12
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(12553..13545)
-----------------
DNA (993bp)
protein (331aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000373C6CE
leucine aminopeptidase
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_711_curated_13
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(13545..15059)
-----------------
DNA (1515bp)
protein (505aa)
Potassium/proton antiporter id=3592046 bin=GWC2_Bacteroidetes_46_850 species=Galbibacter marinus genus=Galbibacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
cvrA, nhaP2, ycgO; potassium/proton antiporter; K11105 cell volume regulation protein A
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_711_curated_14
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(15069..15977)
-----------------
DNA (909bp)
protein (303aa)
Uncharacterized proteins, homologs of microcin C7 resistance protein MccF (EC:3.4.17.13)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003758A1F
Carboxypeptidase {ECO:0000313|EMBL:CEA15530.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
SCNpilot_bf_inoc_scaffold_711_curated_15
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(15986..17944)
-----------------
DNA (1959bp)
protein (653aa)
DNA gyrase subunit B; K02470 DNA gyrase subunit B [EC:5.99.1.3]
DNA gyrase subunit B id=3592050 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_711_curated_16
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(18087..18392)
-----------------
DNA (306bp)
protein (102aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036645C1
Uncharacterized protein {ECO:0000313|EMBL:CEA15528.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
stress responsive alpha-beta barrel domaiN-containing protein
SCNpilot_bf_inoc_scaffold_711_curated_17
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(18502..18756)
-----------------
DNA (255bp)
protein (85aa)
30S ribosomal protein S20 id=3592052 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
rpsT; 30S ribosomal protein S20; K02968 small subunit ribosomal protein S20
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_711_curated_18
unknown

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comp(18871..19419)
-----------------
DNA (549bp)
protein (183aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_711_curated_19
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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19456..20130
-----------------
DNA (675bp)
protein (225aa)
Uncharacterized protein {ECO:0000313|EMBL:CEA15525.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
Putative uncharacterized protein id=3592054 bin=GWC2_Bacteroidetes_46_850 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
pasta domain containing protein
SCNpilot_bf_inoc_scaffold_711_curated_20
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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20148..21230
-----------------
DNA (1083bp)
protein (361aa)
ribosomal large subunit pseudouridine synthase D; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037B8F4B
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_711_curated_21
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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21234..22238
-----------------
DNA (1005bp)
protein (335aa)
ddl; D-alanyl-alanine synthetase A (EC:6.3.2.4); K01921 D-alanine-D-alanine ligase [EC:6.3.2.4]
D-alanine--D-alanine ligase id=2119764 bin=GWD2_Bacteroidales_45_23 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_711_curated_22
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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22222..23409
-----------------
DNA (1188bp)
protein (396aa)
Putative uncharacterized protein id=3592060 bin=GWC2_Bacteroidetes_46_850 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_711_curated_23
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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23414..24022
-----------------
DNA (609bp)
protein (203aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037AB87A
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_711_curated_24
Prevotella sp. C561, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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24309..26162
-----------------
DNA (1854bp)
protein (618aa)
hypothetical protein n=1 Tax=Prevotella nanceiensis RepID=UPI00035C9DF4
Uncharacterized protein {ECO:0000313|EMBL:EGW48917.1}; TaxID=563031 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella sp. C561.;"
hypothetical protein; K09952 hypothetical protein
Displaying 24 items

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