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SCNpilot_bf_inoc_scaffold_305_curated

Search features with annotation key words

Displaying items 31-54 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_305_curated_31
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(31480..33636)
DNA (2157bp) protein (719aa)
elongation factor G n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035FF94C
fusA; elongation factor G; K02355 elongation factor G
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_305_curated_32
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33965..35128
DNA (1164bp) protein (388aa)
Phosphoglycerate dehydrogenase id=3591595 bin=GWC2_Bacteroidetes_46_850 species=Desulfitobacterium metallireducens genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
phosphoglycerate dehydrogenase-like oxidoreductase
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_305_curated_33
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(35144..35692)
DNA (549bp) protein (183aa)
Biotin/lipoyl attachment domain-containing protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1U7_PALPW
biotin/lipoyl attachment domaiN-containing protein
Biotin/lipoyl attachment domain-containing protein {ECO:0000313|EMBL:ADQ78691.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_305_curated_34
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35709..37205)
DNA (1497bp) protein (499aa)
carbamoyL-phosphate synthase l chain ATP-binding protein (EC:6.4.1.1); K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
Carbamoyl-phosphate synthase L chain ATP-binding protein {ECO:0000313|EMBL:ADQ78690.1}; EC=6.4.1.1 {ECO:0000313|EMBL:ADQ78690.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Carbamoyl-phosphate synthase L chain ATP-binding protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1U6_PALPW
SCNpilot_bf_inoc_scaffold_305_curated_35
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37209..38741)
DNA (1533bp) protein (511aa)
propionyL-CoA carboxylase carboxyltransferase subunit (EC:6.4.1.3)
Propionyl-CoA carboxylase carboxyltransferase subunit {ECO:0000313|EMBL:ADQ78689.1}; EC=6.4.1.3 {ECO:0000313|EMBL:ADQ78689.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Propionyl-CoA carboxylase carboxyltransferase subunit n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1U5_PALPW
SCNpilot_bf_inoc_scaffold_305_curated_36
unknown

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39002..39508
DNA (507bp) protein (169aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_305_curated_37
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

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39635..41161
DNA (1527bp) protein (509aa)
Similar to cobalt-zinc-cadmium resistance protein CzcB id=4548953 bin=GWF2_Bacteroidetes_41_61 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Bacteroidetes_41_61 organism_group=Bacteroidetes organism_desc=a118
RND family efflux transporter MFP subunit
Tax=BJP_08E140C01_Bacteroidetes_41_49
SCNpilot_bf_inoc_scaffold_305_curated_38
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

41178..44273
DNA (3096bp) protein (1032aa)
Cation efflux transporter id=1768111 bin=GWE2_Bacteroidetes_40_15 species=unknown genus=unknown taxon_order=unknown taxon_class=Planctomycetia phylum=Planctomycetes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
CzcA family heavy metal efflux pump
Tax=BJP_08E140C01_Bacteroidetes_41_49
SCNpilot_bf_inoc_scaffold_305_curated_39
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

44313..45488
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis HMW 615 RepID=K1FN28_BACFG
hypothetical protein
Outer membrane efflux family protein {ECO:0000313|EMBL:EXZ05643.1}; TaxID=1339276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. DS-208.;"
SCNpilot_bf_inoc_scaffold_305_curated_40
Chlorobium phaeobacteroides, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(45527..46186)
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003614BC2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE05288.1}; TaxID=331678 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium phaeobacteroides (strain BS1).;"
SCNpilot_bf_inoc_scaffold_305_curated_41
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(46197..46793)
DNA (597bp) protein (199aa)
Metal dependent phosphohydrolase n=1 Tax=Flavobacterium enshiense DK69 RepID=V6SD35_9FLAO
metal dependent phosphohydrolase; K07023 putative hydrolases of HD superfamily
Tax=GWB2_Bacteroidetes_41_8_curated
SCNpilot_bf_inoc_scaffold_305_curated_42
unknown

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comp(46772..46900)
DNA (129bp) protein (43aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_305_curated_43
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(46858..47769)
DNA (912bp) protein (304aa)
Putative uncharacterized protein id=1809425 bin=GWD2_Bacteroidales_45_23 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
bile acid:sodium symporter
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_305_curated_44
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(47823..48746)
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000364B51D
esterase/lipase
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_305_curated_45
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(48743..49336)
DNA (594bp) protein (198aa)
gmk; guanylate kinase (EC:2.7.4.8); K00942 guanylate kinase [EC:2.7.4.8]
Guanylate kinase id=4136997 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_305_curated_46
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(49326..50198)
DNA (873bp) protein (291aa)
TIGR00255-like family protein id=4136995 bin=GWC2_Bacteroidetes_46_850 species=Tannerella forsythia genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_305_curated_47
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(50487..51200)
DNA (714bp) protein (238aa)
transcriptional regulator n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000363869A
two-component response regulator
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_305_curated_48
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(51203..52762)
DNA (1560bp) protein (520aa)
two-component system sensor histidine kinase; K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035E649D
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_305_curated_49
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(53053..53781)
DNA (729bp) protein (243aa)
Uncharacterized protein {ECO:0000313|EMBL:CEA16105.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
CDP-alcohol phosphatidyltransferase id=1809437 bin=GWD2_Bacteroidales_45_23 species=Porphyromonas catoniae genus=Porphyromonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein
SCNpilot_bf_inoc_scaffold_305_curated_50
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(53967..54581)
DNA (615bp) protein (205aa)
30S ribosomal protein S16 id=4756170 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
rpsP; 30S ribosomal protein S16; K02959 small subunit ribosomal protein S16
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_305_curated_51
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

54745..55914
DNA (1170bp) protein (390aa)
Uncharacterized protein id=2120134 bin=GWD2_Bacteroidales_45_23 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
ATPase AAA; K07133
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_305_curated_52
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

56070..57392
DNA (1323bp) protein (441aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B3EE45
outer membrane protein
Outer membrane protein {ECO:0000313|EMBL:AEW00506.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_bf_inoc_scaffold_305_curated_53
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

57382..58314
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B776A4
Uncharacterized protein {ECO:0000313|EMBL:KIA84128.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
RND family efflux transporter MFP subunit
SCNpilot_bf_inoc_scaffold_305_curated_54
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

58319..61351
DNA (3033bp) protein (1011aa)
Acriflavin resistance protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TER8_NIAKG
acriflavin resistance protein
Acriflavin resistance protein {ECO:0000313|EMBL:AEW00504.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying items 31-54 of 54 in total

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