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SCNpilot_bf_inoc_scaffold_305_curated

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_305_curated_1
unknown

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226..552
DNA (327bp) protein (109aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_305_curated_2
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1111..2454
DNA (1344bp) protein (448aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
adenylosuccinate lyase (EC:4.3.2.2); K01756 adenylosuccinate lyase [EC:4.3.2.2]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000369EE1E
SCNpilot_bf_inoc_scaffold_305_curated_3
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2654..3754
DNA (1101bp) protein (367aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
ribosomal large subunit pseudouridine synthase B; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036AC33F
SCNpilot_bf_inoc_scaffold_305_curated_4
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3809..5242
DNA (1434bp) protein (478aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
asnC; asparaginyl-tRNA synthetase (EC:6.1.1.22); K01893 asparaginyl-tRNA synthetase [EC:6.1.1.22]
asparaginyl-tRNA synthetase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000371CC8E
SCNpilot_bf_inoc_scaffold_305_curated_5
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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5257..7044
DNA (1788bp) protein (596aa)
GTP-binding protein LepA n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003817E13
lepA; GTP-binding protein LepA; K03596 GTP-binding protein LepA
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_305_curated_6
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(7070..7438)
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035E5FAC
Uncharacterized protein {ECO:0000313|EMBL:EOR30622.1}; TaxID=1216967 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_305_curated_7
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(7449..8270)
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036CBDBE
Peptidase M23B {ECO:0000313|EMBL:EOR30623.1}; TaxID=1216967 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535.;"
nlpD; putative lipoprotein
SCNpilot_bf_inoc_scaffold_305_curated_8
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8570..9667)
DNA (1098bp) protein (366aa)
Uncharacterized protein n=2 Tax=Bacteroides ovatus RepID=I9SYS0_BACOV
Uncharacterized protein {ECO:0000313|EMBL:CEA15747.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_305_curated_9
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9691..11712)
DNA (2022bp) protein (674aa)
Putative vitamin B12 receptor n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WTG2_BACF6
Outer membrane vitamin B12 receptor protein {ECO:0000313|EMBL:CEA15748.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
btuB; putative vitamin B12 receptor
SCNpilot_bf_inoc_scaffold_305_curated_10
Porphyromonas macacae, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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12093..12965
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Porphyromonas sp. oral taxon 279 str. F0450 RepID=J6H309_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KGN76283.1}; TaxID=28115 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas macacae.;"
Phosphoenolpyruvate carboxykinase.
SCNpilot_bf_inoc_scaffold_305_curated_11
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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12967..13821
DNA (855bp) protein (285aa)
hypothetical protein AtheD1_02521 id=2095208 bin=GWD2_Bacteroidales_45_23 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_305_curated_12
Porphyromonas sp. KLE 1280, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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13838..14107
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Porphyromonas sp. oral taxon 278 str. W7784 RepID=U2IUW8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KDU79100.1}; TaxID=997829 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. KLE 1280.;"
SCNpilot_bf_inoc_scaffold_305_curated_13
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14100..15212
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Porphyromonas sp. oral taxon 278 str. W7784 RepID=U2ICG8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CEA16598.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_305_curated_14
Porphyromonas macacae, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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15213..16832
DNA (1620bp) protein (540aa)
ABC transporter transmembrane region n=1 Tax=Porphyromonas sp. oral taxon 279 str. F0450 RepID=J4VS59_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KGN76286.1}; TaxID=28115 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas macacae.;"
ABC transporter, ATP-binding protein
SCNpilot_bf_inoc_scaffold_305_curated_15
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(16834..17703)
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036D77DB
Uncharacterized protein {ECO:0000313|EMBL:CEA15749.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
lipoprotein
SCNpilot_bf_inoc_scaffold_305_curated_16
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17793..19232
DNA (1440bp) protein (480aa)
tRNA nucleotidyltransferase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003790798
Uncharacterized protein {ECO:0000313|EMBL:CEA15750.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
polynucleotide adenylyltransferase/metal dependent phosphohydrolase
SCNpilot_bf_inoc_scaffold_305_curated_17
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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19301..20176
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037A3135
cell division protein FtsX; K09811 cell division transport system permease protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_305_curated_18
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20288..20527
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037F251B
Uncharacterized protein {ECO:0000313|EMBL:CEA15753.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_305_curated_19
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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20524..21408
DNA (885bp) protein (295aa)
UDP-diphosphatase (EC:3.6.1.27); K06153 undecaprenyl-diphosphatase [EC:3.6.1.27]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035F50BE
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_305_curated_20
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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21408..22112
DNA (705bp) protein (235aa)
tRNA pseudouridine synthase B; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25]
tRNA pseudouridine synthase B id=4369498 bin=GWC2_Bacteroidetes_46_850 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_305_curated_21
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22178..23230
DNA (1053bp) protein (351aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
S-adenosylmethionine--tRNA ribosyltransferase-isomerase; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-]
S-adenosylmethionine tRNA ribosyltransferase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036D74E9
SCNpilot_bf_inoc_scaffold_305_curated_22
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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23232..23726
DNA (495bp) protein (165aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3); K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J3H9_9PORP
7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase {ECO:0000313|EMBL:EGJ99764.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
SCNpilot_bf_inoc_scaffold_305_curated_23
Bacteroides sp. CAG:189, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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23896..24750
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:189 RepID=R5JC89_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCY51965.1}; TaxID=1262737 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:189.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_305_curated_24
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(24924..25721)
DNA (798bp) protein (266aa)
Pirin domain protein id=4352585 bin=GWC2_Spirochaete_52_13 species=Desulfotomaculum ruminis genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
Pirin-like protein; K06911
Tax=BJP_08E140C01_Spirochaeta_53_29
SCNpilot_bf_inoc_scaffold_305_curated_25
unknown

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comp(25763..25930)
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_305_curated_26
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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25973..26839
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000373C7F0
hypothetical protein; K07001 NTE family protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_305_curated_27
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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26836..28533
DNA (1698bp) protein (566aa)
Alpha amylase, catalytic domain protein id=4369502 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
amylase
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_305_curated_28
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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28633..29568
DNA (936bp) protein (312aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1); K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
Ribose-phosphate pyrophosphokinase id=4369503 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_305_curated_29
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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29579..30565
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037534F6
Icc family phosphohydrolase
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_305_curated_30
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(30574..31299)
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036CF4D4
Tax=GWC2_Bacteroidetes_46_850_curated
Displaying items 1-30 of 54 in total

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