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SCNpilot_bf_inoc_scaffold_317_curated

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_317_curated_1
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(47..247)
DNA (201bp) protein (67aa)
ABC transporter ATP-binding protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003690ED1
ABC transporter ATP-binding protein; K06147 ATP-binding cassette, subfamily B, bacterial
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AEW21837.1}; TaxID=203275 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338); (Bacteroides forsythus).;"
SCNpilot_bf_inoc_scaffold_317_curated_2
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(533..2194)
DNA (1662bp) protein (554aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WYH3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CEA16060.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_317_curated_3
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2335..2706)
DNA (372bp) protein (124aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
twitching motility protein PilT n=1 Tax=Marinilabilia salmonicolor RepID=UPI000299E921
PilT protein domain-containing protein; K07062
SCNpilot_bf_inoc_scaffold_317_curated_4
unknown

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comp(2693..2857)
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_317_curated_5
unknown

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comp(3111..3299)
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_317_curated_6
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(3396..5528)
DNA (2133bp) protein (711aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037054B0
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_317_curated_7
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5538..7112)
DNA (1575bp) protein (525aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036214E3
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_317_curated_8
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(7161..8840)
DNA (1680bp) protein (560aa)
heme ABC transporter ATP-binding protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037BA792
ABC transporter ATP-binding protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_317_curated_9
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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9029..9742
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037C4AFD
dienelactone hydrolase
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_317_curated_10
Zobellia galactanivorans, Zobellia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9818..10102
DNA (285bp) protein (95aa)
aldo/keto reductase (EC:1.-.-.-)
Aldo/keto reductase related to aryl-alcohol dehydrogenases {ECO:0000313|EMBL:CAZ98381.1}; EC=1.-.-.- {ECO:0000313|EMBL:CAZ98381.1};; TaxID=63186 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zobellia.;" source="Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871; / Dsij).;"
oxidoreductase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036B9ECA
SCNpilot_bf_inoc_scaffold_317_curated_11
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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10408..11412
DNA (1005bp) protein (335aa)
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase id=1768508 bin=GWD2_Bacteroidales_45_23 species=unknown genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_317_curated_12
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11483..11650)
DNA (168bp) protein (56aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=K5CHW6_9BACE
4Fe-4S binding domain.
Uncharacterized protein {ECO:0000313|EMBL:EOA59566.1}; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
SCNpilot_bf_inoc_scaffold_317_curated_13
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11939..12622
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037D386F
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_317_curated_14
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12609..13631)
DNA (1023bp) protein (341aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003751397
Predicted glycosyltransferases
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_317_curated_15
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13628..14530)
DNA (903bp) protein (301aa)
lipd A biosynthesis related protein; K02517 lipid A biosynthesis lauroyl acyltransferase [EC:2.3.1.-]
Putative uncharacterized protein id=3951479 bin=GWC2_Bacteroidetes_46_850 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
Uncharacterized protein {ECO:0000313|EMBL:CEA15636.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
SCNpilot_bf_inoc_scaffold_317_curated_16
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14542..15861)
DNA (1320bp) protein (440aa)
MiaB-like tRNA modifying enzyme id=1768495 bin=GWD2_Bacteroidales_45_23 species=unknown genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
Fe-S oxidoreductase
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_317_curated_17
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16000..17646
DNA (1647bp) protein (549aa)
long-chain-fatty-acid-CoA ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3]
Uncharacterized protein id=1768493 bin=GWD2_Bacteroidales_45_23 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_317_curated_18
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17802..18026
DNA (225bp) protein (75aa)
id=3951476 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_317_curated_19
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18121..18735
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003634796
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_317_curated_20
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19149..20213
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S8V2_PEDSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY52433.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
SCNpilot_bf_inoc_scaffold_317_curated_21
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20314..20826
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FW35_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EEI92815.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_317_curated_22
unknown

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comp(20836..21045)
DNA (210bp) protein (70aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_317_curated_23
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21208..21609)
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037243F5
Uncharacterized protein {ECO:0000313|EMBL:EDO53415.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_317_curated_24
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21643..21879)
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037CEF3F
Uncharacterized protein {ECO:0000313|EMBL:EFV25455.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_317_curated_25
unknown

Not on your lists

comp(21984..22148)
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_317_curated_26
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22956..23738
DNA (783bp) protein (261aa)
sulfide dehydrogenase (flavoprotein) subunit sudb (EC:1.8.1.-); K00528 ferredoxin--NADP+ reductase [EC:1.18.1.2]
Putative uncharacterized protein id=3052326 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_317_curated_27
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23784..25256
DNA (1473bp) protein (491aa)
NADPH-dependent glutamate synthase; K00266 glutamate synthase (NADPH/NADH) small chain [EC:1.4.1.13 1.4.1.14]
dihydropyrimidine dehydrogenase subunit A n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003772B24
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_317_curated_28
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25253..26575)
DNA (1323bp) protein (441aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003620222
outer membrane protein TolC
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_317_curated_29
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26563..29598)
DNA (3036bp) protein (1012aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037C3F7B
multidrug efflux membrane fusion protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_317_curated_30
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29603..30703)
DNA (1101bp) protein (367aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003771937
Uncharacterized protein {ECO:0000313|EMBL:CEA16361.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
membrane fusion protein
Displaying items 1-30 of 48 in total

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