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SCNpilot_bf_inoc_scaffold_318_curated

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Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_318_curated_1
Alistipes sp. CAG:514, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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144..623
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:514 RepID=R5B7W4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCX51695.1}; TaxID=1262696 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:514.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_318_curated_2
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1138..2556)
DNA (1419bp) protein (473aa)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrolase {ECO:0000256|HAMAP-Rule:MF_00563}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1); K01251 adenosylhomocysteinase [EC:3.3.1.1]
Adenosylhomocysteinase id=1897922 bin=GWD2_Bacteroidales_45_23 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
SCNpilot_bf_inoc_scaffold_318_curated_3
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2639..2965
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003714C6E
Putative membrane protein {ECO:0000313|EMBL:CEA15698.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_318_curated_4
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3000..3953
DNA (954bp) protein (318aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
peptide methionine sulfoxide reductase (EC:1.8.4.11 1.8.4.12); K12267 peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000363FAC5
SCNpilot_bf_inoc_scaffold_318_curated_5
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4025..4588
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003683FFE
Uncharacterized protein {ECO:0000313|EMBL:CEA15696.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
transport-associated
SCNpilot_bf_inoc_scaffold_318_curated_6
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4597..5007
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037FB31C
Uncharacterized protein {ECO:0000313|EMBL:CEA15695.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
SH3 type 3 domain-containing protein
SCNpilot_bf_inoc_scaffold_318_curated_7
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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5172..5915
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037F8939
putative glycosyl transferase
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_318_curated_8
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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5918..6565
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000366E56C
transport-related, membrane protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_318_curated_9
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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6555..8102
DNA (1548bp) protein (516aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000363D096
dolichyl-phosphate-mannose-protein mannosyltransferase family protein rbh
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_318_curated_10
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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8113..9132
DNA (1020bp) protein (340aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037F4A4A
UDP-glucuronic acid epimerase
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_318_curated_11
Bacteroides salanitronis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9108..9755)
DNA (648bp) protein (216aa)
uridine kinase (EC:2.7.1.48); K00876 uridine kinase [EC:2.7.1.48]
Uridine kinase {ECO:0000256|RuleBase:RU003825, ECO:0000256|SAAS:SAAS00007563}; EC=2.7.1.48 {ECO:0000256|RuleBase:RU003825, ECO:0000256|SAAS:SAAS00007538};; Flags: Precursor;; TaxID=667015 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salanitronis (strain DSM 18170 / JCM 13567 / BL78).;"
Uridine kinase n=1 Tax=Bacteroides salanitronis (strain DSM 18170 / JCM 13567 / BL78) RepID=F0R806_BACSH
SCNpilot_bf_inoc_scaffold_318_curated_12
Coprobacter sp. 177, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9799..10278)
DNA (480bp) protein (160aa)
Arginine repressor n=1 Tax=Tannerella sp. CAG:118 RepID=R5IQ57_9PORP
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=1572646 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter sp. 177.;"
transcriptional regulator; K03402 transcriptional regulator of arginine metabolism
SCNpilot_bf_inoc_scaffold_318_curated_13
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10275..10868)
DNA (594bp) protein (198aa)
Putative uncharacterized protein id=1809458 bin=GWD2_Bacteroidales_45_23 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_318_curated_14
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10900..11946)
DNA (1047bp) protein (349aa)
Putative uncharacterized protein id=4136931 bin=GWC2_Bacteroidetes_46_850 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_318_curated_15
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12056..13285
DNA (1230bp) protein (410aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|SAAS:SAAS00094434};; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
S-adenosylmethionine--tRNA ribosyltransferase-isomerase; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-] rbh
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000368265A
SCNpilot_bf_inoc_scaffold_318_curated_16
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13426..13695
DNA (270bp) protein (90aa)
Oxaloacetate decarboxylase, gamma chain. (EC:4.1.1.3)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003804F64
Uncharacterized protein {ECO:0000313|EMBL:KJF45205.1}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp. JN14CK-3.;"
SCNpilot_bf_inoc_scaffold_318_curated_17
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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13717..15630
DNA (1914bp) protein (638aa)
pyruvate carboxylase subunit B (EC:4.1.1.3 6.4.1.1)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000382EF1B
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_318_curated_18
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15777..16985
DNA (1209bp) protein (403aa)
oxaloacetate decarboxylase subunit beta; K01572 oxaloacetate decarboxylase, beta subunit [EC:4.1.1.3]
glutaconyl-CoA decarboxylase subunit beta n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036E9E1B
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_318_curated_19
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16994..18520)
DNA (1527bp) protein (509aa)
ATP-dependent Zn protease id=1884868 bin=GWD2_Bacteroidales_45_23 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_318_curated_20
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(18736..19164)
DNA (429bp) protein (143aa)
GCN5-related N-acetyltransferase id=3590625 bin=GWC2_Bacteroidetes_46_850 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_318_curated_21
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19164..19505)
DNA (342bp) protein (114aa)
id=1934097 bin=GWD2_Bacteroidales_45_23 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_318_curated_22
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19569..20729)
DNA (1161bp) protein (387aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035F8D2E
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_318_curated_23
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20713..21525)
DNA (813bp) protein (271aa)
murQ; N-acetylmuramic acid 6-phosphate etherase; K07106 N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
N-acetylmuramic acid-6-phosphate etherase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037DF369
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_318_curated_24
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21569..22414)
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036BC5BA
hypothetical protein rbh
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_318_curated_25
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22600..23772)
DNA (1173bp) protein (391aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000374C1EE
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_318_curated_26
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24043..25320)
DNA (1278bp) protein (426aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037815E8
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_318_curated_27
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25339..26670)
DNA (1332bp) protein (444aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036CAB2C
beta-lactamase induction signal transducer; K08218 MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_318_curated_28
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26702..28054)
DNA (1353bp) protein (451aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035D514B
Uncharacterized protein {ECO:0000313|EMBL:CEA15979.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_318_curated_29
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28021..29472)
DNA (1452bp) protein (484aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036AABCF
glycosyltransferase rbh
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_318_curated_30
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29499..32534)
DNA (3036bp) protein (1012aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036F6F63
metallophosphoesterase
Tax=GWC2_Bacteroidetes_46_850_curated
Displaying items 1-30 of 56 in total

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