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SCNpilot_bf_inoc_scaffold_150_curated

Search features with annotation key words

Displaying items 1-30 of 191 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_150_curated_1
Capnocytophaga granulosa, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

160..387
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Capnocytophaga granulosa ATCC 51502 RepID=S2WLY1_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EPD28884.1}; TaxID=641143 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga granulosa ATCC 51502.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_150_curated_2
Bacteroides faecis CAG:32, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

459..824
DNA (366bp) protein (122aa)
DNA-binding helix-turn-helix protein n=1 Tax=Bacteroides faecis CAG:32 RepID=R6V8C2_9BACE
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDC88301.1}; TaxID=1263044 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides faecis CAG:32.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_150_curated_3
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

971..1264
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. HPS0048 RepID=U6RQU7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOA58964.1}; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_150_curated_4
Capnocytophaga gingivalis, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1426..2043
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Clostridiales bacterium NK3B98 RepID=UPI0003B614A3
Uncharacterized protein {ECO:0000313|EMBL:EEK14868.1}; TaxID=553178 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga gingivalis ATCC 33624.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_150_curated_5
unknown

Not on your lists

2775..2879
DNA (105bp) protein (35aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_150_curated_6
GWD2_Clostridiales_32_59_curated, Clostridiales, Bacteria

Not on your lists

2991..4124
DNA (1134bp) protein (378aa)
Putative uncharacterized protein id=1774082 bin=GWD2_Clostridiales_32_59 species=Marinobacter hydrocarbonoclasticus genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Clostridiales_32_59 organism_group=Firmicute organism_desc=a65
hypothetical protein
Tax=GWD2_Clostridiales_32_59_curated
SCNpilot_bf_inoc_scaffold_150_curated_7
Prevotella sp. CAG:1320, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4124..5017
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:1320 RepID=R6E2T4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDA94075.1}; TaxID=1262922 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:1320.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_150_curated_8
Bacteroidales bacterium CF, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5014..6303
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Bacteroidales bacterium CF RepID=U5Q805_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGY54578.1}; TaxID=1400053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales.;" source="Bacteroidales bacterium CF.;"
SCNpilot_bf_inoc_scaffold_150_curated_9
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6655..7248
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Bacteroides gallinarum RepID=UPI0003820FC5
Uncharacterized protein {ECO:0000313|EMBL:KDS11708.1}; TaxID=1339346 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus str. 3725 D1 iv.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_150_curated_10
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7245..7433
DNA (189bp) protein (63aa)
Putative uncharacterized protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WJE9_BACOV
Putative uncharacterized protein {ECO:0000313|EMBL:EFF51322.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_150_curated_11
Flavobacterium branchiophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8357..9631
DNA (1275bp) protein (425aa)
Transposase IS1634 family n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z3W1_FLABF
transposase IS1634 family
Transposase IS1634 family {ECO:0000313|EMBL:CCB68292.1}; TaxID=1034807 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium branchiophilum (strain FL-15).;"
SCNpilot_bf_inoc_scaffold_150_curated_12
Tannerella sp. oral taxon BU063, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9778..10182)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NL55_BACSE
Uncharacterized protein {ECO:0000313|EMBL:ETK08675.1}; TaxID=1411022 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella sp. oral taxon BU063 isolate Cell 1/3.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_150_curated_13
unknown

Not on your lists

comp(10232..10417)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Y8W9_9BACT
SCNpilot_bf_inoc_scaffold_150_curated_14
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10875..11918
DNA (1044bp) protein (348aa)
UDP-3-O-acylglucosamine N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00523}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_00523};; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; K02536 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037AC189
SCNpilot_bf_inoc_scaffold_150_curated_15
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12035..13414
DNA (1380bp) protein (460aa)
bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-ACP dehydratase; K02372 3R-hydroxymyristoyl ACP dehydrase [EC:4.2.1.-]; K02535 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
hydroxymyristoyl-ACP dehydratase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003762F61
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_150_curated_16
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13428..14216
DNA (789bp) protein (263aa)
lpxA; acyl-CoA dehydrogenase; K00677 UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003787B74
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_150_curated_17
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14223..15245
DNA (1023bp) protein (341aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036D6356
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_150_curated_18
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15270..16142
DNA (873bp) protein (291aa)
N-carbamoylputrescine amidase {ECO:0000313|EMBL:CEA16430.1}; EC=3.5.1.53 {ECO:0000313|EMBL:CEA16430.1};; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
beta-ureidopropionase; K12251 N-carbamoylputrescine amidase [EC:3.5.1.53]
apolipoprotein acyltransferase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036F1273
SCNpilot_bf_inoc_scaffold_150_curated_19
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16213..17433)
DNA (1221bp) protein (407aa)
isocitrate dehydrogenase (nadp) (EC:1.1.1.42); K00031 isocitrate dehydrogenase [EC:1.1.1.42]
isocitrate dehydrogenase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000380D2C2
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_150_curated_20
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17435..18796)
DNA (1362bp) protein (454aa)
citrate synthase; K01647 citrate synthase [EC:2.3.3.1]
Citrate synthase id=1847010 bin=GWD2_Bacteroidales_45_23 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_150_curated_21
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18891..20165)
DNA (1275bp) protein (425aa)
isocitrate dehydrogenase, NADP-dependent (EC:1.1.1.42); K00031 isocitrate dehydrogenase [EC:1.1.1.42]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003726E46
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_150_curated_22
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20162..22429)
DNA (2268bp) protein (756aa)
aconitase (EC:4.2.1.3); K01681 aconitate hydratase 1 [EC:4.2.1.3]
Aconitate hydratase id=4755854 bin=GWC2_Bacteroidetes_46_850 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_150_curated_23
unknown

Not on your lists

22498..22605
DNA (108bp) protein (36aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_150_curated_24
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22571..24595
DNA (2025bp) protein (675aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037C906A
oligopeptide transporter
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_150_curated_25
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24910..25059
DNA (150bp) protein (50aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036E50F2
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_150_curated_26
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25185..25625
DNA (441bp) protein (147aa)
alkylhydroperoxidase id=4596336 bin=GWC2_Bacteroidetes_46_850 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
alkylhydroperoxidase
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_150_curated_27
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25630..26520)
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003653F97
cation diffusion facilitator family transporter; K03295 cation efflux system protein, CDF family
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_150_curated_28
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26663..28804
DNA (2142bp) protein (714aa)
ptrB; protease 2; K01354 oligopeptidase B [EC:3.4.21.83]
Protease 2 n=1 Tax=Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338) RepID=G8UQB8_TANFA
Protease 2 {ECO:0000313|EMBL:BAR50130.1}; TaxID=1307832 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia 3313.;"
SCNpilot_bf_inoc_scaffold_150_curated_29
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28844..29191
DNA (348bp) protein (116aa)
Putative uncharacterized protein id=3591824 bin=GWC2_Bacteroidetes_46_850 species=Methanobacterium sp. genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_150_curated_30
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29571..30983
DNA (1413bp) protein (471aa)
hypothetical protein MsalJ2_00205 id=3202046 bin=GWC2_Bacteroidetes_46_850 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
glucose sorbosone dehydrogenase
Tax=GWC2_Bacteroidetes_46_850_curated
Displaying items 1-30 of 191 in total

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