ggKbase home page

SCNpilot_bf_inoc_scaffold_488_curated

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_488_curated_1
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

216..3614
DNA (3399bp) protein (1133aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K6B1Y4_9PORP
TonB-linked outer membrane , SusC/RagA family protein {ECO:0000313|EMBL:KDS59686.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_488_curated_2
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

3627..5132
DNA (1506bp) protein (502aa)
RagB/SusD domain-containing protein n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J1I4_CYCMS
Uncharacterized protein {ECO:0000313|EMBL:AKD03699.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
RagB/SusD domain-containing protein
SCNpilot_bf_inoc_scaffold_488_curated_3
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5252..6274
DNA (1023bp) protein (341aa)
id=3159701 bin=GWF2_Bacteroidetes_42_66 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
Tax=GWE2_Bacteroidetes_42_39_curated
SCNpilot_bf_inoc_scaffold_488_curated_4
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

6271..7194
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0G0L5_ECHVK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA78853.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
SCNpilot_bf_inoc_scaffold_488_curated_5
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7212..8723
DNA (1512bp) protein (504aa)
Arylsulfatase n=1 Tax=Bacteroides caccae CAG:21 RepID=R5V1P1_9BACE
sulfatase
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_488_curated_6
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8759..10081
DNA (1323bp) protein (441aa)
Oxidoreductase domain protein id=1884191 bin=GWD2_Bacteroidales_45_23 species=Runella slithyformis genus=Runella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
oxidoreductase domain-containing protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_488_curated_7
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10089..11021
DNA (933bp) protein (311aa)
xylose isomerase domain-containing protein; K03082 hexulose-6-phosphate isomerase [EC:5.-.-.-]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037ED8E6
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_488_curated_8
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11012..11503)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. HPS0048 RepID=U6RLS0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KKB53057.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
SCNpilot_bf_inoc_scaffold_488_curated_9
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11504..12178)
DNA (675bp) protein (225aa)
narI; respiratory nitrate reductase gamma subunit (EC:1.7.99.4); K00374 nitrate reductase 1, gamma subunit [EC:1.7.99.4]
Respiratory nitrate reductase, gamma subunit n=1 Tax=Bacteroides sp. HPS0048 RepID=U6RK66_9BACE
Respiratory nitrate reductase, gamma subunit {ECO:0000313|EMBL:KKB53055.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
SCNpilot_bf_inoc_scaffold_488_curated_10
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12157..12699)
DNA (543bp) protein (181aa)
Nitrate reductase molybdenum cofactor assembly chaperone n=1 Tax=Bacteroides sp. HPS0048 RepID=U6RJD3_9BACE
Nitrate reductase molybdenum cofactor assembly chaperone {ECO:0000313|EMBL:EOA56162.1}; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
respiratory nitrate reductase chaperone NarJ; K00373 nitrate reductase 1, delta subunit
SCNpilot_bf_inoc_scaffold_488_curated_11
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12726..14198)
DNA (1473bp) protein (491aa)
narH1; nitrate reductase subunit beta (EC:1.7.99.4); K00371 nitrate reductase 1, beta subunit [EC:1.7.99.4]
Nitrate reductase, beta subunit n=1 Tax=Bacteroides sp. HPS0048 RepID=U6RLS4_9BACE
Nitrate reductase, beta subunit {ECO:0000313|EMBL:EOA56163.1}; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
SCNpilot_bf_inoc_scaffold_488_curated_12
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14195..17920)
DNA (3726bp) protein (1242aa)
respiratory nitrate reductase alpha subunit apoprotein (EC:1.97.1.9); K00370 nitrate reductase 1, alpha subunit [EC:1.7.99.4]
Nitrate reductase, alpha subunit n=1 Tax=Bacteroides sp. HPS0048 RepID=U6RHS2_9BACE
Nitrate reductase, alpha subunit {ECO:0000313|EMBL:KKB53052.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
SCNpilot_bf_inoc_scaffold_488_curated_13
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18024..19319)
DNA (1296bp) protein (432aa)
MFS transporter, NNP family, nitrate/nitrite transporter n=1 Tax=Bacteroides sp. HPS0048 RepID=U6RI35_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KKB53051.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
major facilitator superfamily protein; K02575 MFS transporter, NNP family, nitrate/nitrite transporter
SCNpilot_bf_inoc_scaffold_488_curated_14
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19312..19884)
DNA (573bp) protein (191aa)
Probable molybdenum cofactor guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Short=MoCo guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316};; EC=2.7.7.77 {ECO:0000256|HAMAP-Rule:MF_00316};; GTP:molybdopterin guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Mo-MPT guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Molybdopterin guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Molybdopterin-guanine dinucleotide synthase {ECO:0000256|HAMAP-Rule:MF_00316}; TaxID=1078089 species="Bacteri
molybdopterin-guanine dinucleotide biosynthesis protein A; K03752 molybdopterin-guanine dinucleotide biosynthesis protein A [EC:2.7.7.77]
Probable molybdenum cofactor guanylyltransferase n=1 Tax=Bacteroides sp. HPS0048 RepID=U6RK72_9BACE
SCNpilot_bf_inoc_scaffold_488_curated_15
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19892..20518)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. HPS0048 RepID=U6RJD7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KKB53049.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
SCNpilot_bf_inoc_scaffold_488_curated_16
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20736..21428
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. HPS0048 RepID=U6RLT0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KKB53048.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
SCNpilot_bf_inoc_scaffold_488_curated_17
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21659..22399
DNA (741bp) protein (247aa)
Gluconate transporter id=1847236 bin=GWD2_Bacteroidales_45_23 species=Pedobacter heparinus genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
putative D-glycerate permease
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_488_curated_18
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22363..22986
DNA (624bp) protein (208aa)
Gluconate transporter id=4755740 bin=GWC2_Bacteroidetes_46_850 species=Pedobacter heparinus genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
gluconate transporter
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_488_curated_19
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22996..24369
DNA (1374bp) protein (458aa)
hydroxypyruvate reductase (EC:1.1.1.81); K00050 hydroxypyruvate reductase [EC:1.1.1.81]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000376D953
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_488_curated_20
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24601..25518
DNA (918bp) protein (306aa)
xylose isomerase domain-containing protein; K03082 hexulose-6-phosphate isomerase [EC:5.-.-.-]
Xylose isomerase domain-containing protein TIM barrel id=4946246 bin=GWC2_Bacteroidetes_46_850 species=Runella slithyformis genus=Runella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_488_curated_21
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25529..26887
DNA (1359bp) protein (453aa)
Uncharacterized protein {ECO:0000313|EMBL:CEA16179.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
Putative uncharacterized protein id=4946245 bin=GWC2_Bacteroidetes_46_850 species=Alistipes indistinctus genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
Tat pathway signal sequence domain-containing protein
SCNpilot_bf_inoc_scaffold_488_curated_22
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26908..28161
DNA (1254bp) protein (418aa)
Uncharacterized protein {ECO:0000313|EMBL:CEA16189.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
NADH-dependent dehydrogenase id=1884183 bin=GWD2_Bacteroidales_45_23 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
NADH-dependent dehydrogenase
SCNpilot_bf_inoc_scaffold_488_curated_23
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28180..31566
DNA (3387bp) protein (1129aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036DA562
Uncharacterized protein {ECO:0000313|EMBL:CEA16190.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
PBS lyase HEAT-like repeat protein
SCNpilot_bf_inoc_scaffold_488_curated_24
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31684..31983
DNA (300bp) protein (100aa)
Nucleotidyltransferase domain protein n=2 Tax=Parabacteroides johnsonii RepID=B7BGC7_9PORP
Nucleotidyltransferase domain protein {ECO:0000313|EMBL:EEC94514.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
nucleotidyltransferase; K07075
SCNpilot_bf_inoc_scaffold_488_curated_25
unknown

Not on your lists

31970..32089
DNA (120bp) protein (40aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_488_curated_26
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32147..33319
DNA (1173bp) protein (391aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000367C042
esterase; K07214 enterochelin esterase and related enzymes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_488_curated_27
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33460..33969
DNA (510bp) protein (170aa)
Uncharacterized protein {ECO:0000313|EMBL:CEA16192.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
Putative uncharacterized protein id=1884848 bin=GWD2_Bacteroidales_45_23 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein
SCNpilot_bf_inoc_scaffold_488_curated_28
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33987..34385
DNA (399bp) protein (133aa)
Putative uncharacterized protein id=4596451 bin=GWC2_Bacteroidetes_46_850 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
phosphoribosyltransferase; K07101
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_488_curated_29
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34382..36265
DNA (1884bp) protein (628aa)
Putative uncharacterized protein id=1884852 bin=GWD2_Bacteroidales_45_23 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
TonB-dependent outer membrane receptor protein; K02014 iron complex outermembrane recepter protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_488_curated_30
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36298..37239
DNA (942bp) protein (314aa)
Tat pathway signal sequence domain protein id=4596443 bin=GWC2_Bacteroidetes_46_850 species=Bacteroides fluxus genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
Displaying items 1-30 of 31 in total

View Taxonomy