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SCNpilot_bf_inoc_scaffold_1265_curated

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_1265_curated_1
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(48..347)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 PF0_9PORP">RepID=K5ZPF0_9PORP
Sigma factor regulatory protein FecR/PupR family {ECO:0000313|EMBL:CDD13770.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
SCNpilot_bf_inoc_scaffold_1265_curated_2
Bacteroides faecis CAG:32, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(437..1057)
DNA (621bp) protein (207aa)
RNA polymerase sigma-70 factor, ECF subfamily n=2 Tax=Bacteroides RepID=D7IAA2_9BACE
RNA polymerase sigma-70 factor ECF subfamily {ECO:0000313|EMBL:CDC90107.1}; TaxID=1263044 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides faecis CAG:32.;"
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1
SCNpilot_bf_inoc_scaffold_1265_curated_3
unknown

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comp(1191..1334)
DNA (144bp) protein (48aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1265_curated_4
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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1366..2238
DNA (873bp) protein (291aa)
Metallopeptidase, zinc binding id=4805203 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=Porphyromonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
hypothetical protein; K07054
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_1265_curated_5
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

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comp(2259..3212)
DNA (954bp) protein (318aa)
nitrilase n=1 Tax=Flavobacterium sp. WG21 RepID=UPI000346C5AF
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Tax=BJP_IG2069_Bacteroidetes_43_11
SCNpilot_bf_inoc_scaffold_1265_curated_6
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(3226..3921)
DNA (696bp) protein (232aa)
ABC transporter, ATP-binding protein id=1934247 bin=GWD2_Bacteroidales_45_23 species=Bacteroidetes oral taxon 274 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
ABC transporter; K01990 ABC-2 type transport system ATP-binding protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_1265_curated_7
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(4089..5570)
DNA (1482bp) protein (494aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037538F4
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_1265_curated_8
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(5581..7119)
DNA (1539bp) protein (513aa)
Putative uncharacterized protein id=3591102 bin=GWC2_Bacteroidetes_46_850 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
hypothetical protein; K06915
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_1265_curated_9
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(7256..8035)
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00035F6E04
transcriptional regulator
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain {ECO:0000313|EMBL:AGA80384.1}; Flags: Precursor;; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
SCNpilot_bf_inoc_scaffold_1265_curated_10
Elizabethkingia sp. BM10, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(8343..9749)
DNA (1407bp) protein (469aa)
aldehyde dehydrogenase n=1 Tax=Empedobacter brevis RepID=UPI00035D4B52
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=722877 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia sp. BM10.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1265_curated_11
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9864..10676)
DNA (813bp) protein (271aa)
Arsenite S-adenosylmethyltransferase n=1 Tax=Imtechella halotolerans K1 RepID=I0W5J9_9FLAO
Arsenite S-adenosylmethyltransferase {ECO:0000313|EMBL:KIO47394.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
methylase involved in ubiquinone/menaquinone biosynthesis
SCNpilot_bf_inoc_scaffold_1265_curated_12
Chryseobacterium oranimense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10734..11060)
DNA (327bp) protein (109aa)
Transcriptional regulator, ArsR family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W8Y8_9FLAO
HTH-type transcriptional repressor CzrA {ECO:0000313|EMBL:CEJ72009.1}; TaxID=1300143 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium oranimense G311.;"
ArsR family transcriptional regulator
SCNpilot_bf_inoc_scaffold_1265_curated_13
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(11241..13391)
DNA (2151bp) protein (717aa)
Serine protease, peptidase S9 family protein n=1 Tax=Psychroflexus gondwanensis ACAM 44 RepID=N1WNW8_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFC20092.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
serine protease, peptidase S9 family
SCNpilot_bf_inoc_scaffold_1265_curated_14
Chryseobacterium luteum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13602..14444
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Bacteroides propionicifaciens RepID=UPI00036780C0
Recombinase {ECO:0000313|EMBL:KFF08738.1}; TaxID=421531 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium luteum.;"
integrase family protein
SCNpilot_bf_inoc_scaffold_1265_curated_15
Bacteroides pyogenes, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14633..15001
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Bacteroides pyogenes F0041 RepID=U2CWB3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:GAE20637.1}; TaxID=1121100 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides pyogenes DSM 20611 = JCM 6294.;"
SCNpilot_bf_inoc_scaffold_1265_curated_16
Bacteroides pyogenes, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14994..15362
DNA (369bp) protein (123aa)
Element, Orf2 protein, IS66 family n=1 Tax=Bacteroides pyogenes F0041 RepID=U2CEB7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:GAE20636.1}; TaxID=1121100 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides pyogenes DSM 20611 = JCM 6294.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1265_curated_17
Bacteroides pyogenes, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15439..16968
DNA (1530bp) protein (510aa)
IS66 family element, transposase n=1 Tax=Bacteroides pyogenes F0041 RepID=U2CXP1_9BACE
IS66 family element, transposase {ECO:0000313|EMBL:ERI88838.1}; TaxID=1321819 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides pyogenes F0041.;"
hypothetical protein
Displaying 17 items

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