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SCNpilot_bf_inoc_scaffold_495_curated

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_495_curated_1
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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193..1338
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9H599_9SPHI
DNA-binding protein {ECO:0000313|EMBL:AIL44322.1}; TaxID=1338011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis NUHP1.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_495_curated_2
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1335..1832
DNA (498bp) protein (166aa)
PIN domain protein n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GXW9_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AIL44321.1}; TaxID=1338011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis NUHP1.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_495_curated_3
unknown

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2378..2821
DNA (444bp) protein (148aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_495_curated_4
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(2825..4204)
DNA (1380bp) protein (460aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000366405E
glycoside hydrolase
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_495_curated_5
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(4234..5169)
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037FDBF0
CaCA family Na+/Ca+ antiporter; K07301 inner membrane protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_495_curated_6
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5280..5798)
DNA (519bp) protein (173aa)
RNA polymerase sigma factor n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003635E6A
Uncharacterized protein {ECO:0000313|EMBL:CEA16394.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
RNA polymerase, sigma-24 subunit, ecf subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_bf_inoc_scaffold_495_curated_7
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6376..8265
DNA (1890bp) protein (630aa)
heat shock protein Hsp90 n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000373255D
heat shock protein 90; K04079 molecular chaperone HtpG
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_495_curated_8
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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8309..9262
DNA (954bp) protein (318aa)
Pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_00215, ECO:0000256|RuleBase:RU003530}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_00215, ECO:0000256|RuleBase:RU003530};; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_00215}; TaxID=1307833 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia KS16.;"
coaA; pantothenate kinase; K00867 type I pantothenate kinase [EC:2.7.1.33]
Pantothenate kinase n=1 Tax=Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338) RepID=G8UJC7_TANFA
SCNpilot_bf_inoc_scaffold_495_curated_9
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9249..9656)
DNA (408bp) protein (136aa)
HIT family hydrolase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003750ED7
Uncharacterized protein {ECO:0000313|EMBL:EGK01648.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
HIT family protein; K02503 Hit-like protein involved in cell-cycle regulation
SCNpilot_bf_inoc_scaffold_495_curated_10
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9757..10227)
DNA (471bp) protein (157aa)
Transcription elongation factor GreA id=4755910 bin=GWC2_Bacteroidetes_46_850 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
greA; transcription elongation factor GreA; K03624 transcription elongation factor GreA
SCNpilot_bf_inoc_scaffold_495_curated_11
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(10385..11545)
DNA (1161bp) protein (387aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000373798B
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_495_curated_12
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11664..12203
DNA (540bp) protein (180aa)
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8); K00760 hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037814D6
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_495_curated_13
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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12645..13340
DNA (696bp) protein (232aa)
TonB-dependent receptor id=1846880 bin=GWD2_Bacteroidales_45_23 species=Tannerella forsythia genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
TonB-dependent receptor; K03832 periplasmic protein TonB
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_495_curated_14
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13426..14403
DNA (978bp) protein (326aa)
isoprenoid biosynthesis-like protein; K13789 geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Uncharacterized protein id=1846878 bin=GWD2_Bacteroidales_45_23 species=Bacteroides nordii genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_495_curated_15
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14413..15108
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035CDEA8
Uncharacterized protein {ECO:0000313|EMBL:CEA16387.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_495_curated_16
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15105..15905
DNA (801bp) protein (267aa)
deoxyribonuclease; K03424 TatD DNase family protein [EC:3.1.21.-]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036F1418
Uncharacterized protein {ECO:0000313|EMBL:CEA16386.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
SCNpilot_bf_inoc_scaffold_495_curated_17
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16297..17085
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000362716A
MotA/TolQ/ExbB proton channel family protein rbh
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_495_curated_18
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17091..17570
DNA (480bp) protein (160aa)
Putative uncharacterized protein id=1846870 bin=GWD2_Bacteroidales_45_23 species=Tannerella forsythia genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_495_curated_19
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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17598..18233
DNA (636bp) protein (212aa)
Uncharacterized protein id=4755953 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
biopolymer transport protein ExbD/TolR
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_495_curated_20
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18268..18693
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000368E867
Uncharacterized protein {ECO:0000313|EMBL:CEA16382.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_495_curated_21
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18747..19973)
DNA (1227bp) protein (409aa)
sulfatase-maturase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003800D95
anaerobic sulfatase-maturase; K06871 uncharacterized protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_495_curated_22
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20027..21235)
DNA (1209bp) protein (403aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037FBA1D
ABC transporter; K09686 antibiotic transport system permease protein
ABC-2 type transporter {ECO:0000313|EMBL:ADQ79038.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_495_curated_23
Bacteroidales bacterium CF, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(21219..22430)
DNA (1212bp) protein (404aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036A341A
ABC-2 Type Transporter {ECO:0000313|EMBL:AGY54841.1}; TaxID=1400053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales.;" source="Bacteroidales bacterium CF.;"
ABC transporter; K09686 antibiotic transport system permease protein
SCNpilot_bf_inoc_scaffold_495_curated_24
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22450..23466)
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003801732
secretion protein hlyd family protein; K01993 HlyD family secretion protein
Secretion protein HlyD family protein {ECO:0000313|EMBL:ADQ79036.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_495_curated_25
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23532..25058)
DNA (1527bp) protein (509aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000381D4DD
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:ADQ79035.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_495_curated_26
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25204..25644)
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003600839
transcriptional regulator, marr family
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ADQ79034.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_495_curated_27
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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26010..27233
DNA (1224bp) protein (408aa)
peptidase T. Metallo peptidase. MEROPS family M20B (EC:3.4.11.4)
Peptidase T id=1846865 bin=GWD2_Bacteroidales_45_23 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_495_curated_28
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27252..28337
DNA (1086bp) protein (362aa)
Aminomethyltransferase {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981};; Glycine cleavage system T protein {ECO:0000256|HAMAP-Rule:MF_00259}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
gcvT; glycine cleavage system aminomethyltransferase T (EC:2.1.2.10); K00605 aminomethyltransferase [EC:2.1.2.10]
glycine cleavage system protein T n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00038073A8
SCNpilot_bf_inoc_scaffold_495_curated_29
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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28378..29382
DNA (1005bp) protein (335aa)
Putative uncharacterized protein id=4755959 bin=GWC2_Bacteroidetes_46_850 species=Sphingobacterium spiritivorum genus=Sphingobacterium taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_495_curated_30
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29426..30442
DNA (1017bp) protein (339aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}
ribosomal RNA large subunit methyltransferase N; K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003663152
Displaying items 1-30 of 46 in total

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