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SCNpilot_bf_inoc_scaffold_1126_curated

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_1126_curated_1
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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84..1409
-----------------
DNA (1326bp)
protein (442aa)
Predicted ATPase (AAA+ superfamily) n=6 Tax=Bacteroides RepID=D6D1A0_9BACE
Predicted ATPase (AAA+ superfamily)
Uncharacterized protein {ECO:0000313|EMBL:EEO51525.1}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
SCNpilot_bf_inoc_scaffold_1126_curated_2
Prevotella nigrescens, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1406..1951)
-----------------
DNA (546bp)
protein (182aa)
fumarate hydratase I, C-terminal domain, beta subunit; K01678 fumarate hydratase subunit beta [EC:4.2.1.2]
Hydrolyase, tartrate beta subunit/fumarate domain-containing protein, Fe-S type n=1 Tax=Prevotella nigrescens F0103 RepID=L9PTM9_9BACT
Hydrolyase, tartrate beta subunit/fumarate domain-containing protein, Fe-S type {ECO:0000313|EMBL:ELX66805.1}; TaxID=702439 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella nigrescens F0103.;"
SCNpilot_bf_inoc_scaffold_1126_curated_3
Porphyromonadaceae bacterium COT-184 OH4590, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1948..2790)
-----------------
DNA (843bp)
protein (281aa)
Fumarate hydratase {ECO:0000313|EMBL:KGN77466.1}; EC=4.2.1.2 {ECO:0000313|EMBL:KGN77466.1};; TaxID=1517682 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium COT-184 OH4590.;"
hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type; K01677 fumarate hydratase subunit alpha [EC:4.2.1.2]
Fumarate hydratase, alpha subunit n=1 Tax=Bacteroidetes oral taxon 274 str. F0058 RepID=D7JFF4_9BACT
SCNpilot_bf_inoc_scaffold_1126_curated_4
Tannerella sp. oral taxon BU063, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2768..3730)
-----------------
DNA (963bp)
protein (321aa)
Uncharacterized protein n=1 Tax=Bacteroides coprosuis DSM 18011 RepID=F3ZU92_9BACE
Uncharacterized protein {ECO:0000313|EMBL:ETK09988.1}; TaxID=1411021 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella sp. oral taxon BU063 isolate Cell 6/7/9.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1126_curated_5
Tannerella sp. oral taxon BU063, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3743..4063)
-----------------
DNA (321bp)
protein (107aa)
Uncharacterized protein n=1 Tax=Bacteroides coprosuis DSM 18011 RepID=F3ZU91_9BACE
Acyl-CoA synthetase {ECO:0000313|EMBL:ETK05394.1}; TaxID=1410950 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella sp. oral taxon BU063 isolate Cell 5.;"
PF14330 domain protein
SCNpilot_bf_inoc_scaffold_1126_curated_6
Porphyromonadaceae bacterium COT-184 OH4590, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4076..5434)
-----------------
DNA (1359bp)
protein (453aa)
Lipoprotein n=1 Tax=Bacteroidetes oral taxon 274 str. F0058 RepID=D7JFG4_9BACT
3-methylaspartate ammonia-lyase {ECO:0000313|EMBL:KGN79832.1}; TaxID=1517682 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium COT-184 OH4590.;"
PF07287 domain protein
SCNpilot_bf_inoc_scaffold_1126_curated_7
Bacteroidetes oral taxon 274, Bacteroidetes, Bacteria

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comp(5427..6677)
-----------------
DNA (1251bp)
protein (417aa)
methylaspartate ammonia-lyase (EC:4.3.1.2); K04835 methylaspartate ammonia-lyase [EC:4.3.1.2]
Methylaspartate ammonia-lyase n=1 Tax=Bacteroidetes oral taxon 274 str. F0058 RepID=D7JFG5_9BACT
Methylaspartate ammonia-lyase {ECO:0000313|EMBL:EFI17634.1}; TaxID=575590 species="Bacteria; Bacteroidetes.;" source="Bacteroidetes oral taxon 274 str. F0058.;"
SCNpilot_bf_inoc_scaffold_1126_curated_8
Tannerella sp. oral taxon BU063, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6709..8160)
-----------------
DNA (1452bp)
protein (484aa)
Glutamate mutase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_01923}; EC=5.4.99.1 {ECO:0000256|HAMAP-Rule:MF_01923};; Glutamate mutase E chain {ECO:0000256|HAMAP-Rule:MF_01923}; Glutamate mutase large subunit {ECO:0000256|HAMAP-Rule:MF_01923}; Methylaspartate mutase {ECO:0000256|HAMAP-Rule:MF_01923}; TaxID=1411022 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella sp. oral taxon BU063 isolate Cell 1/3.;"
methylaspartate mutase subunit E (EC:5.4.99.1)
Methylaspartate mutase, E subunit n=1 Tax=Bacteroidetes oral taxon 274 str. F0058 RepID=D7JFG6_9BACT
SCNpilot_bf_inoc_scaffold_1126_curated_9
Bacteroidetes oral taxon 274, Bacteroidetes, Bacteria

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comp(8208..9590)
-----------------
DNA (1383bp)
protein (461aa)
DNA mismatch repair protein mutL n=1 Tax=Bacteroidetes oral taxon 274 str. F0058 RepID=D7JFG7_9BACT
DNA mismatch repair protein mutL {ECO:0000313|EMBL:EFI17636.1}; TaxID=575590 species="Bacteria; Bacteroidetes.;" source="Bacteroidetes oral taxon 274 str. F0058.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1126_curated_10
Tannerella sp. oral taxon BU063, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9587..10000)
-----------------
DNA (414bp)
protein (138aa)
Glutamate mutase sigma subunit {ECO:0000256|HAMAP-Rule:MF_00526}; EC=5.4.99.1 {ECO:0000256|HAMAP-Rule:MF_00526};; Glutamate mutase S chain {ECO:0000256|HAMAP-Rule:MF_00526}; Glutamate mutase small subunit {ECO:0000256|HAMAP-Rule:MF_00526}; Methylaspartate mutase {ECO:0000256|HAMAP-Rule:MF_00526}; TaxID=1411021 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella sp. oral taxon BU063 isolate Cell 6/7/9.;"
mamA; methylaspartate mutase, S subunit (EC:5.4.99.1)
Methylaspartate mutase S chain n=1 Tax=Bacteroidetes oral taxon 274 str. F0058 RepID=D7JFG8_9BACT
SCNpilot_bf_inoc_scaffold_1126_curated_11
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(10148..10501)
-----------------
DNA (354bp)
protein (118aa)
Preprotein translocase subunit SecG id=3503576 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
secG; preprotein translocase subunit SecG; K03075 preprotein translocase subunit SecG
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_1126_curated_12
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10506..11243)
-----------------
DNA (738bp)
protein (246aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036D8B12
Uncharacterized protein {ECO:0000313|EMBL:CEA17167.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1126_curated_13
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(11246..11749)
-----------------
DNA (504bp)
protein (168aa)
Putative uncharacterized protein id=2063424 bin=GWD2_Bacteroidales_45_23 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_1126_curated_14
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(11746..12966)
-----------------
DNA (1221bp)
protein (407aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036D19DB
transcriptional regulator
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_1126_curated_15
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13068..13901)
-----------------
DNA (834bp)
protein (278aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003647D98
Uncharacterized protein {ECO:0000313|EMBL:CEA17170.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
hemolysin
SCNpilot_bf_inoc_scaffold_1126_curated_16
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(13993..15375)
-----------------
DNA (1383bp)
protein (461aa)
phosphoglucomutase; K01840 phosphomannomutase [EC:5.4.2.8]
Phosphoglucosamine mutase id=3503565 bin=GWC2_Bacteroidetes_46_850 species=Tannerella forsythia genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_1126_curated_17
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(15382..15966)
-----------------
DNA (585bp)
protein (195aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000376EA86
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_1126_curated_18
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(16293..16733)
-----------------
DNA (441bp)
protein (147aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035E5FAC
Uncharacterized protein {ECO:0000313|EMBL:ETZ19711.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1126_curated_19
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(16726..17112)
-----------------
DNA (387bp)
protein (129aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000381B5BC
Uncharacterized protein {ECO:0000313|EMBL:ERJ58412.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;"
hypothetical protein
Displaying 19 items

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