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SCNpilot_bf_inoc_scaffold_1537_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_1537_curated_1
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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1..345
-----------------
DNA (345bp)
protein (115aa)
Putative uncharacterized protein id=4482800 bin=GWC2_Bacteroidetes_46_850 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_1537_curated_2
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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602..1636
-----------------
DNA (1035bp)
protein (345aa)
Signal transduction histidine kinase, LytS id=1957662 bin=GWD2_Bacteroidales_45_23 species=Leadbetterella byssophila genus=Leadbetterella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
signal transduction histidine kinase, lyts
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_1537_curated_3
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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1633..2394
-----------------
DNA (762bp)
protein (254aa)
Two component transcriptional regulator, LytTR family id=2565453 bin=GWC2_Bacteroidetes_46_850 species=Mucilaginibacter paludis genus=Mucilaginibacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
LytTR family two component transcriptional regulator
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_1537_curated_4
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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2512..3783
-----------------
DNA (1272bp)
protein (424aa)
Type I secretion outer membrane protein id=1957664 bin=GWD2_Bacteroidales_45_23 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
type I secretion outer membrane protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_1537_curated_5
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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3806..4858
-----------------
DNA (1053bp)
protein (351aa)
RND family efflux transporter, MFP subunit id=1957666 bin=GWD2_Bacteroidales_45_23 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
RND family efflux transporter, MFP subunit
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_1537_curated_6
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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4911..5657
-----------------
DNA (747bp)
protein (249aa)
ABC transporter related protein id=1957668 bin=GWD2_Bacteroidales_45_23 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
ABC-type antimicrobial peptide transport system,ATPase component
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_1537_curated_7
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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5647..6861
-----------------
DNA (1215bp)
protein (405aa)
ABC-type antimicrobial peptide transport system, permease component id=1957670 bin=GWD2_Bacteroidales_45_23 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
ABC-type antimicrobial peptide transport system, permease component
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_1537_curated_8
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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6896..8119
-----------------
DNA (1224bp)
protein (408aa)
ABC-type antimicrobial peptide transport system, permease component id=1957672 bin=GWD2_Bacteroidales_45_23 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
ABC-type antimicrobial peptide transport system, permease component
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_1537_curated_9
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(8292..9839)
-----------------
DNA (1548bp)
protein (516aa)
RagB/SusD domain-containing protein id=2565696 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_1537_curated_10
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(9859..12264)
-----------------
DNA (2406bp)
protein (802aa)
SusC/RagA family TonB-linked outer membrane protein id=1957676 bin=GWD2_Bacteroidales_45_23 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
Displaying 10 items

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