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SCNpilot_bf_inoc_scaffold_491_curated

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Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_491_curated_1
Prevotella buccalis, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(43..486)
-----------------
DNA (444bp)
protein (148aa)
RHS repeat-associated core domain-containing protein id=2667704 bin=GWC2_Bacteroidetes_46_850 species=Bacteroides cellulosilyticus genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
RHS repeat-associated core domain protein {ECO:0000313|EMBL:EFA93250.1}; TaxID=679190 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella buccalis ATCC 35310.;"
RHS repeat-associated core domain-containing protein
SCNpilot_bf_inoc_scaffold_491_curated_2
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(884..1222)
-----------------
DNA (339bp)
protein (113aa)
RHS repeat-associated core domain-containing protein id=2082339 bin=GWD2_Bacteroidales_45_23 species=Bacteroides cellulosilyticus genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_491_curated_3
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

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1493..3391
-----------------
DNA (1899bp)
protein (633aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037458D9
hypothetical protein
Tax=GWE2_Bacteroidetes_32_14_curated
SCNpilot_bf_inoc_scaffold_491_curated_4
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3571..4380
-----------------
DNA (810bp)
protein (270aa)
Glycerophosphoryl diester phosphodiesterase (EC:3.1.4.46)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000377FE0C
Uncharacterized protein {ECO:0000313|EMBL:CEA16080.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
SCNpilot_bf_inoc_scaffold_491_curated_5
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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4377..4808
-----------------
DNA (432bp)
protein (144aa)
Uncharacterized protein id=4136845 bin=GWC2_Bacteroidetes_46_850 species=Bacteroides cellulosilyticus genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
metal-dependent phosphohydrolase hd sub domain protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_491_curated_6
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4808..5935
-----------------
DNA (1128bp)
protein (376aa)
putative oxygen-independent coproporphyrinogen III oxidase; K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22]
Oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:CEA16082.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
Oxygen-independent coproporphyrinogen III oxidase id=1809577 bin=GWD2_Bacteroidales_45_23 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
SCNpilot_bf_inoc_scaffold_491_curated_7
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(5937..6740)
-----------------
DNA (804bp)
protein (268aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037F933B
glutamine ABC transporter glutamine-binding protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_491_curated_8
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(6766..8817)
-----------------
DNA (2052bp)
protein (684aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036F377F
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_491_curated_9
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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9233..10090
-----------------
DNA (858bp)
protein (286aa)
hisG; ATP phosphoribosyltransferase (ATP-PRTase) (EC:2.4.2.17)
ATP phosphoribosyltransferase id=3591126 bin=GWC2_Bacteroidetes_46_850 species=Elizabethkingia anophelis genus=Elizabethkingia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_491_curated_10
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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10107..11414
-----------------
DNA (1308bp)
protein (436aa)
histidinol dehydrogenase; K00013 histidinol dehydrogenase [EC:1.1.1.23]
Histidinol dehydrogenase id=3591130 bin=GWC2_Bacteroidetes_46_850 species=Elizabethkingia anophelis genus=Elizabethkingia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_491_curated_11
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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11401..12438
-----------------
DNA (1038bp)
protein (346aa)
histidinol-phosphate aminotransferase (EC:2.6.1.9); K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9]
Histidinol-phosphate aminotransferase id=1934312 bin=GWD2_Bacteroidales_45_23 species=Elizabethkingia anophelis genus=Elizabethkingia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_491_curated_12
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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12440..13531
-----------------
DNA (1092bp)
protein (364aa)
imidazole glycerol-phosphate dehydratase/histidinol phosphatase (EC:3.1.3.15 4.2.1.19); K01089 imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000378336B
Histidine biosynthesis bifunctional protein HisB {ECO:0000256|SAAS:SAAS00082593}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
SCNpilot_bf_inoc_scaffold_491_curated_13
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13544..14122
-----------------
DNA (579bp)
protein (193aa)
hisH; imidazole glycerol phosphate synthase, glutamine amidotransferase class-I subunit (EC:2.4.2.-)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000374B82A
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_491_curated_14
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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14119..14859
-----------------
DNA (741bp)
protein (247aa)
phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC:5.3.1.16); K01814 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000366695D
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_491_curated_15
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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14889..15650
-----------------
DNA (762bp)
protein (254aa)
Imidazole glycerol phosphate synthase cyclase subunit; K02500 cyclase [EC:4.1.3.-]
Imidazole glycerol phosphate synthase subunit HisF id=3591152 bin=GWC2_Bacteroidetes_46_850 species=unidentified eubacterium SCB49 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_491_curated_16
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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15691..16278
-----------------
DNA (588bp)
protein (196aa)
phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19 3.6.1.31); K11755 phosphoribosyl-ATP pyrophosphohydrolase / phosphoribosyl-AMP cyclohydrolase [EC:3.6.1.31 3.5.4.19]
Phosphoribosyl-AMP cyclohydrolase id=3591155 bin=GWC2_Bacteroidetes_46_850 species=Elizabethkingia anophelis genus=Elizabethkingia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_491_curated_17
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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16689..17291
-----------------
DNA (603bp)
protein (201aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003794D34
hypothetical protein; K08999 hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_491_curated_18
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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17275..17991
-----------------
DNA (717bp)
protein (239aa)
16S ribosomal RNA methyltransferase RsmE; K09761 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J1U2_9PORP
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_491_curated_19
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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18079..19644
-----------------
DNA (1566bp)
protein (522aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003706EA0
microcystin LR degradation protein MlrC
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_491_curated_20
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19648..20304
-----------------
DNA (657bp)
protein (219aa)
endonuclease III; K10773 endonuclease III [EC:4.2.99.18]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000366021D
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_491_curated_21
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(20363..20581)
-----------------
DNA (219bp)
protein (73aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036ADD67
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_491_curated_22
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(20600..21778)
-----------------
DNA (1179bp)
protein (393aa)
aldose 1-epimerase; K01785 aldose 1-epimerase [EC:5.1.3.3] rbh
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000367438A
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_491_curated_23
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21842..22876)
-----------------
DNA (1035bp)
protein (345aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003600869
glycoside hydrolase 43
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_491_curated_24
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22887..24041)
-----------------
DNA (1155bp)
protein (385aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035F1D36
Uncharacterized protein {ECO:0000313|EMBL:CEA16129.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_491_curated_25
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24020..25816)
-----------------
DNA (1797bp)
protein (599aa)
beta-galactosidase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000363367D
beta-galactosidase rbh
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_491_curated_26
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25937..29908)
-----------------
DNA (3972bp)
protein (1324aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000380AE82
Signal transduction histidine kinase
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_491_curated_27
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29940..31037)
-----------------
DNA (1098bp)
protein (366aa)
Putative uncharacterized protein id=4755711 bin=GWC2_Bacteroidetes_46_850 species=Pedobacter heparinus genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_491_curated_28
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(31129..32001)
-----------------
DNA (873bp)
protein (291aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000360877D
glycoside hydrolase 43
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_491_curated_29
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32098..34155)
-----------------
DNA (2058bp)
protein (686aa)
Uncharacterized protein {ECO:0000313|EMBL:CEA16133.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
Putative uncharacterized protein id=3836187 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
hypothetical protein
SCNpilot_bf_inoc_scaffold_491_curated_30
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34173..35612)
-----------------
DNA (1440bp)
protein (480aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037BB810
glycosyl hydrolase
Tax=GWC2_Bacteroidetes_46_850_curated
Displaying items 1-30 of 68 in total

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