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SCNpilot_bf_inoc_scaffold_390_curated

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Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_390_curated_1
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(76..825)
DNA (750bp) protein (250aa)
UPF0246 protein BFO_3311 n=1 Tax=Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338) RepID=G8UIV7_TANFA
hypothetical protein; K09861 hypothetical protein
UPF0246 protein BFO_3311 {ECO:0000256|HAMAP-Rule:MF_00652}; TaxID=203275 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338); (Bacteroides forsythus).;"
SCNpilot_bf_inoc_scaffold_390_curated_2
Capnocytophaga sp. oral taxon 326, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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1248..2408
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Capnocytophaga sp. oral taxon 326 str. F0382 RepID=L1P8V9_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EKY12081.1}; TaxID=1035193 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga sp. oral taxon 326 str. F0382.;"
hypothetical protein rbh
SCNpilot_bf_inoc_scaffold_390_curated_3
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(2443..3921)
DNA (1479bp) protein (493aa)
cysteinyL-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16]
cysteinyl-tRNA synthetase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003642F44
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_390_curated_4
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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4089..4790
DNA (702bp) protein (234aa)
Putative uncharacterized protein id=3870075 bin=GWC2_Bacteroidetes_46_850 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_390_curated_5
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4812..6128
DNA (1317bp) protein (439aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000361AC93
Putative permease MJ0326 {ECO:0000313|EMBL:CEA16850.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
permease
SCNpilot_bf_inoc_scaffold_390_curated_6
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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6210..6776
DNA (567bp) protein (189aa)
Elongation factor P id=3870091 bin=GWC2_Bacteroidetes_46_850 species=Porphyromonas endodontalis genus=Porphyromonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
efp-2; elongation factor P; K02356 elongation factor P rbh
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_390_curated_7
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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6864..7553
DNA (690bp) protein (230aa)
Putative uncharacterized protein id=3870093 bin=GWC2_Bacteroidetes_46_850 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
DNA repair protein RadC; K03630 DNA repair protein RadC
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_390_curated_8
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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7560..7877
DNA (318bp) protein (106aa)
FeS assembly SUF system protein id=3870095 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_390_curated_9
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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7884..8624
DNA (741bp) protein (247aa)
UDP-2,3-diacylglucosamine hydrolase; K03269 UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
Putative uncharacterized protein id=2095370 bin=GWD2_Bacteroidales_45_23 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_390_curated_10
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(8728..10086)
DNA (1359bp) protein (453aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000373356B
Domain of Unknown Function (DUF1080).
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_390_curated_11
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(10112..11533)
DNA (1422bp) protein (474aa)
oxidoreductase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037B5283
dehydrogenase
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_390_curated_12
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(11569..12855)
DNA (1287bp) protein (429aa)
hypothetical protein MsalJ2_14741 id=4483269 bin=GWC2_Bacteroidetes_46_850 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_390_curated_13
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(12863..14317)
DNA (1455bp) protein (485aa)
6-phosphogluconate dehydrogenase; K00033 6-phosphogluconate dehydrogenase [EC:1.1.1.44]
6-phosphogluconate dehydrogenase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037CF6D4
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_390_curated_14
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(14356..15432)
DNA (1077bp) protein (359aa)
gck2; Gck (EC:2.7.1.45)
2-keto-3-deoxygluconate kinase id=4483273 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_390_curated_15
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(15447..16259)
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000369BC8C
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_390_curated_16
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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16514..17587
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003667E24
transcriptional regulator catabolite control protein A; K02529 LacI family transcriptional regulator
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_390_curated_17
BJP_08E140C01_Flavobacteriales_35_8, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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17690..18448
DNA (759bp) protein (253aa)
osmotically inducible protein C n=1 Tax=Gillisia marina RepID=UPI00029AF08E
osmc family protein; K06889; K07397 putative redox protein
Tax=BJP_08E140C01_Flavobacteriales_35_8
SCNpilot_bf_inoc_scaffold_390_curated_18
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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18615..20303
DNA (1689bp) protein (563aa)
Putative uncharacterized protein id=2095504 bin=GWD2_Bacteroidales_45_23 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_390_curated_19
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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20553..23588
DNA (3036bp) protein (1012aa)
Putative uncharacterized protein id=2095506 bin=GWD2_Bacteroidales_45_23 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
TonB-dependent receptor plug
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_390_curated_20
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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23594..25081
DNA (1488bp) protein (496aa)
Putative uncharacterized protein id=3870319 bin=GWC2_Bacteroidetes_46_850 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
RagB/SusD domain-containing protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_390_curated_21
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25136..26575
DNA (1440bp) protein (480aa)
Putative uncharacterized protein id=3870321 bin=GWC2_Bacteroidetes_46_850 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_390_curated_22
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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26632..28386
DNA (1755bp) protein (585aa)
Putative uncharacterized protein id=2095521 bin=GWD2_Bacteroidales_45_23 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_390_curated_23
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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28410..30914
DNA (2505bp) protein (835aa)
Alpha-glucosidases, family 31 of glycosyl hydrolases (EC:3.2.1.20)
Putative uncharacterized protein id=3870326 bin=GWC2_Bacteroidetes_46_850 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_390_curated_24
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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30938..33130
DNA (2193bp) protein (731aa)
Putative uncharacterized protein id=3870329 bin=GWC2_Bacteroidetes_46_850 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_390_curated_25
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(33112..33747)
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036B5493
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_390_curated_26
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33811..35529)
DNA (1719bp) protein (573aa)
DNA polymerase III; K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Uncharacterized protein {ECO:0000313|EMBL:CEA16816.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
Putative uncharacterized protein id=4483174 bin=GWC2_Bacteroidetes_46_850 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
SCNpilot_bf_inoc_scaffold_390_curated_27
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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35653..36633
DNA (981bp) protein (327aa)
Uncharacterized protein id=4483172 bin=GWC2_Bacteroidetes_46_850 species=Bacteroides nordii genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_390_curated_28
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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36644..37441
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037A951F
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_390_curated_29
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(37503..39098)
DNA (1596bp) protein (532aa)
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453};; TaxID=1307832 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia 3313.;"
pckA; phosphoenolpyruvate carboxykinase; K01610 phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
phosphoenolpyruvate carboxykinase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036AB3AB
SCNpilot_bf_inoc_scaffold_390_curated_30
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39415..40074
DNA (660bp) protein (220aa)
Uracil phosphoribosyltransferase {ECO:0000313|EMBL:CEA16821.1}; EC=2.4.2.9 {ECO:0000313|EMBL:CEA16821.1};; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
upp; uracil phosphoribosyltransferase (EC:2.4.2.9); K00761 uracil phosphoribosyltransferase [EC:2.4.2.9] rbh
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037A81CB
Displaying items 1-30 of 38 in total

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