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SCNpilot_bf_inoc_scaffold_297_curated

Search features with annotation key words

Displaying items 31-60 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_297_curated_31
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(37788..38951)
DNA (1164bp) protein (388aa)
Putative uncharacterized protein id=4484167 bin=GWC2_Bacteroidetes_46_850 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_297_curated_32
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38948..39340)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003642482
Uncharacterized protein {ECO:0000313|EMBL:CEA16956.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
transcriptional regulator
SCNpilot_bf_inoc_scaffold_297_curated_33
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


39469..42138
DNA (2670bp) protein (890aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
alaS; alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7]
alanyl-tRNA synthetase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000373EF47
SCNpilot_bf_inoc_scaffold_297_curated_34
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

42290..43321
DNA (1032bp) protein (344aa)
Catabolite control protein A id=3928423 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
transcriptional regulator; K02529 LacI family transcriptional regulator
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_297_curated_35
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

43386..44954
DNA (1569bp) protein (523aa)
Putative major facilitator superfamily (MFS) protein {ECO:0000313|EMBL:CEA14979.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
Major facilitator superfamily permease id=3928424 bin=GWC2_Bacteroidetes_46_850 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
Major facilitator superfamily permease
SCNpilot_bf_inoc_scaffold_297_curated_36
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

44962..46296
DNA (1335bp) protein (445aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035E08A4
glycosidase
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_297_curated_37
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(46291..47235)
DNA (945bp) protein (315aa)
Magnesium and cobalt transporter CorA id=2082108 bin=GWD2_Bacteroidales_45_23 species=unknown genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
magnesium and cobalt transport protein cora; K03284 magnesium transporter
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_297_curated_38
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(47264..48070)
DNA (807bp) protein (269aa)
ksgA; dimethyladenosine transferase; K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000376AC8B
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_297_curated_39
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

48201..49223
DNA (1023bp) protein (341aa)
Membrane protein id=2082106 bin=GWD2_Bacteroidales_45_23 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein; K07027
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_297_curated_40
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

49233..50699
DNA (1467bp) protein (489aa)
aminoacyl-histidine dipeptidase; K01270 dipeptidase D [EC:3.4.13.-]
Putative uncharacterized protein id=2082105 bin=GWD2_Bacteroidales_45_23 species=unknown genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_297_curated_41
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

50725..50934
DNA (210bp) protein (70aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000367865C
Putative membrane protein {ECO:0000313|EMBL:CEA14719.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
SCNpilot_bf_inoc_scaffold_297_curated_42
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

51022..51495
DNA (474bp) protein (158aa)
Uncharacterized protein {ECO:0000313|EMBL:CEA14722.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
Putative uncharacterized protein id=2082101 bin=GWD2_Bacteroidales_45_23 species=Tannerella forsythia genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein
SCNpilot_bf_inoc_scaffold_297_curated_43
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

51485..51991
DNA (507bp) protein (169aa)
Putative RNA polymerase sigma factor {ECO:0000313|EMBL:CEA14724.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
Sigma-70 region 2 id=2666862 bin=GWC2_Bacteroidetes_46_850 species=Tannerella forsythia genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_bf_inoc_scaffold_297_curated_44
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

51978..52469
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Prevotella timonensis CRIS 5C-B1 RepID=D1W0T7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CEA14727.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_297_curated_45
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

52481..52957
DNA (477bp) protein (159aa)
Uncharacterized protein id=2082098 bin=GWD2_Bacteroidales_45_23 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_297_curated_46
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

53017..54657
DNA (1641bp) protein (547aa)
Putative uncharacterized protein id=2082102 bin=GWD2_Bacteroidales_45_23 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
subtilase family serine protease
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_297_curated_47
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

54666..55925
DNA (1260bp) protein (420aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|SAAS:SAAS00195506};; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
xseA; exodeoxyribonuclease VII large subunit (EC:3.1.11.6); K03601 exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000361BEB5
SCNpilot_bf_inoc_scaffold_297_curated_48
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

55922..56113
DNA (192bp) protein (64aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|SAAS:SAAS00198686};; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
hypothetical protein; K03602 exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036BD1DE
SCNpilot_bf_inoc_scaffold_297_curated_49
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

56167..56856
DNA (690bp) protein (230aa)
putative terpenoid biosynthesis-related protein; K00991 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase id=1890648 bin=GWD2_Bacteroidales_45_23 species=gut metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_297_curated_50
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

56998..57471
DNA (474bp) protein (158aa)
Transcriptional regulator id=1890645 bin=GWD2_Bacteroidales_45_23 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
transcriptional regulator; K03718 Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_297_curated_51
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

57803..58390
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003724115
Uncharacterized protein {ECO:0000313|EMBL:CDE00181.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_297_curated_52
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

58383..58667
DNA (285bp) protein (95aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6AEW6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX77200.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
transcriptional regulator
SCNpilot_bf_inoc_scaffold_297_curated_53
unknown

Not on your lists

58799..59008
DNA (210bp) protein (70aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_297_curated_54
unknown

Not on your lists

59009..59191
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_297_curated_55
Capnocytophaga granulosa, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

59255..59500
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Capnocytophaga granulosa ATCC 51502 RepID=S2VS03_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EPD30243.1}; TaxID=641143 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga granulosa ATCC 51502.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_297_curated_56
unknown

Not on your lists

59457..59567
DNA (111bp) protein (37aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_297_curated_57
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

60584..62071
DNA (1488bp) protein (496aa)
Uncharacterized protein {ECO:0000313|EMBL:CEA16991.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
id=1890546 bin=GWD2_Bacteroidales_45_23 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
SCNpilot_bf_inoc_scaffold_297_curated_58
unknown

Not on your lists

62055..62147
DNA (93bp) protein (31aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_297_curated_59
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

62144..62566
DNA (423bp) protein (141aa)
Uncharacterized protein {ECO:0000313|EMBL:CEA16992.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
Putative uncharacterized protein id=1890543 bin=GWD2_Bacteroidales_45_23 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein
SCNpilot_bf_inoc_scaffold_297_curated_60
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

62568..62801
DNA (234bp) protein (78aa)
Uncharacterized protein id=4781624 bin=GWC2_Bacteroidetes_46_850 species=Belliella baltica genus=Belliella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
Displaying items 31-60 of 66 in total

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