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SCNpilot_bf_inoc_scaffold_297_curated

Search features with annotation key words

Displaying items 1-30 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_297_curated_1
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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137..367
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SC96_PEDSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY51693.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
SCNpilot_bf_inoc_scaffold_297_curated_2
unknown

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348..458
DNA (111bp) protein (37aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_297_curated_3
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

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786..2363
DNA (1578bp) protein (526aa)
Peptidase, S41 family id=2000014 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
peptidase S41
Tax=GWE2_Bacteroidetes_40_63_curated
SCNpilot_bf_inoc_scaffold_297_curated_4
Galbibacter marinus, Galbibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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2823..4073
DNA (1251bp) protein (417aa)
Nuclease SbcCD subunit D n=1 Tax=Galbibacter marinus RepID=K2Q0L5_9FLAO
Nuclease SbcCD subunit D {ECO:0000313|EMBL:EKF54421.1}; TaxID=555500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Galbibacter.;" source="Galbibacter marinus.;"
nuclease SbcCD subunit D; K03547 exonuclease SbcD
SCNpilot_bf_inoc_scaffold_297_curated_5
Galbibacter marinus, Galbibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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4328..8059
DNA (3732bp) protein (1244aa)
SMC domain-containing protein n=1 Tax=Galbibacter marinus RepID=K2PPG5_9FLAO
SMC domain-containing protein {ECO:0000313|EMBL:EKF54420.1}; TaxID=555500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Galbibacter.;" source="Galbibacter marinus.;"
SMC domain-containing protein; K03546 exonuclease SbcC
SCNpilot_bf_inoc_scaffold_297_curated_6
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(8061..9419)
DNA (1359bp) protein (453aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003672BD1
mate efflux family protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_297_curated_7
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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9983..12427
DNA (2445bp) protein (815aa)
thrA; bifunctional aspartokinase I/homoserine dehydrogenase I; K12524 bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037AEC21
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_297_curated_8
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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12466..13671
DNA (1206bp) protein (402aa)
cofactor-independent phosphoglycerate mutase (EC:5.4.2.1); K15635 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.1]
Proposed homoserine kinase id=4484283 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_297_curated_9
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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13668..14972
DNA (1305bp) protein (435aa)
thrC; threonine synthase (EC:4.2.3.1); K01733 threonine synthase [EC:4.2.3.1]
Threonine synthase id=4484281 bin=GWC2_Bacteroidetes_46_850 species=gut metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_297_curated_10
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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15226..17958
DNA (2733bp) protein (911aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036668B5
Uncharacterized protein {ECO:0000313|EMBL:CEA16948.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_297_curated_11
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(17973..19244)
DNA (1272bp) protein (424aa)
ATPase AAA n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000371D52A
recombination factor protein RarA; K07478 putative ATPase
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_297_curated_12
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(19250..19948)
DNA (699bp) protein (233aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0Y3_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ78364.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_297_curated_13
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20031..21395
DNA (1365bp) protein (455aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003752CA9
Putative membrane protein {ECO:0000313|EMBL:CEA16951.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
phospholipid/glycerol acyltransferase
SCNpilot_bf_inoc_scaffold_297_curated_14
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

21609..22667
DNA (1059bp) protein (353aa)
add; adenosine deaminase (EC:3.5.4.4); K01488 adenosine deaminase [EC:3.5.4.4] rbh
hypothetical protein n=1 Tax=SAR406 cluster bacterium SCGC AB-629-J13 RepID=UPI00037A856D
Tax=BJP_08E140C01_Bacteroidetes_41_49
SCNpilot_bf_inoc_scaffold_297_curated_15
Porphyromonas sp. COT-108 OH1349, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22955..23602
DNA (648bp) protein (216aa)
3-oxoacid CoA-transferase subunit A (EC:2.8.3.8); K01034 acetate CoA-transferase alpha subunit [EC:2.8.3.8]
3-oxoacid CoA-transferase, A subunit n=1 Tax=Porphyromonas endodontalis ATCC 35406 RepID=C3JBK9_9PORP
Branched-chain amino acid dehydrogenase {ECO:0000313|EMBL:KGN67801.1}; TaxID=1537504 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-108 OH1349.;"
SCNpilot_bf_inoc_scaffold_297_curated_16
Porphyromonas sp. COT-108 OH1349, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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23614..24018
DNA (405bp) protein (135aa)
Beta-alanyl-CoA:ammonia lyase n=1 Tax=Bacteroidetes oral taxon 274 str. F0058 RepID=D7JF49_9BACT
3-aminobutyryl-CoA ammonia lyase {ECO:0000313|EMBL:KGN67802.1}; TaxID=1537504 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-108 OH1349.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_297_curated_17
Porphyromonas crevioricanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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24030..24860
DNA (831bp) protein (277aa)
3-keto-5-aminohexanoate cleavage enzyme n=2 Tax=Porphyromonas RepID=S4N898_9PORP
3-keto-5-aminohexanoate cleavage protein {ECO:0000313|EMBL:KGN88734.1}; TaxID=393921 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas crevioricanis.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_297_curated_18
Porphyromonas sp. COT-108 OH1349, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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24939..25979
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:831 RepID=R5IBT6_9BACT
L-erythro-3,5-diaminohexanoate dehydrogenase {ECO:0000313|EMBL:KGN67804.1}; TaxID=1537504 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-108 OH1349.;"
L-erythro-3,5-diaminohexanoate dehydrogenase
SCNpilot_bf_inoc_scaffold_297_curated_19
Porphyromonas sp. COT-108 OH1349, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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26001..27239
DNA (1239bp) protein (413aa)
lysine-2,3-aminomutase (EC:5.4.3.2); K01843 lysine 2,3-aminomutase [EC:5.4.3.2]
lysine 2,3-aminomutase n=1 Tax=Butyricimonas synergistica RepID=UPI00036F10E3
Lysine 2,3-aminomutase {ECO:0000313|EMBL:KGN67805.1}; TaxID=1537504 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-108 OH1349.;"
SCNpilot_bf_inoc_scaffold_297_curated_20
Porphyromonas cangingivalis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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27241..28242
DNA (1002bp) protein (334aa)
Uncharacterized protein n=2 Tax=Odoribacter RepID=F9Z8C0_ODOSD
Uncharacterized protein {ECO:0000313|EMBL:KGN78743.1}; TaxID=36874 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas cangingivalis.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_297_curated_21
Porphyromonas sp. COT-108 OH1349, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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28267..29664
DNA (1398bp) protein (466aa)
DNA mismatch repair protein MutS domain protein n=1 Tax=Odoribacter splanchnicus CAG:14 RepID=R6FGX9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KGN67807.1}; TaxID=1537504 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-108 OH1349.;"
DNA mismatch repair protein MutS domain-containing protein
SCNpilot_bf_inoc_scaffold_297_curated_22
Porphyromonas sp. COT-108 OH1349, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29687..31273
DNA (1587bp) protein (529aa)
dioxygenase n=1 Tax=Butyricimonas synergistica RepID=UPI00036AD481
Dioxygenase {ECO:0000313|EMBL:KGN67808.1}; TaxID=1537504 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-108 OH1349.;"
kamD; D-lysine 5,6-aminomutase subunit alpha
SCNpilot_bf_inoc_scaffold_297_curated_23
Porphyromonas sp. COT-108 OH1349, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31270..32067
DNA (798bp) protein (266aa)
dioxygenase n=1 Tax=Butyricimonas synergistica RepID=UPI0003654C37
Dioxygenase {ECO:0000313|EMBL:KGN67809.1}; TaxID=1537504 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-108 OH1349.;"
cobalamin B12-binding domain-containing protein
SCNpilot_bf_inoc_scaffold_297_curated_24
Porphyromonas cangingivalis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32071..32733
DNA (663bp) protein (221aa)
coenzyme A transferase subunit beta; K01035 acetate CoA-transferase beta subunit [EC:2.8.3.8]
Coenzyme A transferase, beta subunit n=7 Tax=Porphyromonas gingivalis RepID=F5XAF8_PORGT
Acetate CoA-transferase {ECO:0000313|EMBL:KGN78739.1}; TaxID=36874 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas cangingivalis.;"
SCNpilot_bf_inoc_scaffold_297_curated_25
Porphyromonas sp. COT-108 OH1349, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32759..33964
DNA (1206bp) protein (402aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:KGN67811.1}; EC=2.3.1.9 {ECO:0000313|EMBL:KGN67811.1};; TaxID=1537504 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-108 OH1349.;"
Acetyl-CoA acetyltransferase n=1 Tax=Bacteroidales bacterium CF RepID=U5Q537_9BACT
hypothetical protein
SCNpilot_bf_inoc_scaffold_297_curated_26
Porphyromonas sp. COT-108 OH1349, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33967..34749
DNA (783bp) protein (261aa)
3-hydroxybutyryl-CoA dehydratase (EC:4.2.1.55); K01715 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
3-hydroxybutyryl-CoA dehydratase n=1 Tax=Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 / NCTC 10825 / 1651/6) RepID=F9Z8C8_ODOSD
Uncharacterized protein {ECO:0000313|EMBL:KGN67812.1}; TaxID=1537504 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-108 OH1349.;"
SCNpilot_bf_inoc_scaffold_297_curated_27
Porphyromonas sp. COT-108 OH1349, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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34760..35605
DNA (846bp) protein (282aa)
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157); K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
Uncharacterized protein n=1 Tax=Odoribacter laneus CAG:561 RepID=R5UPZ3_9PORP
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:KGN67813.1}; TaxID=1537504 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-108 OH1349.;"
SCNpilot_bf_inoc_scaffold_297_curated_28
GWF2_Bacteroidetes_40_14_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(35647..36828)
DNA (1182bp) protein (394aa)
MFS transporter family protein id=4211773 bin=GWF2_Bacteroidetes_40_14 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
major facilitator superfamily transporter
Tax=GWF2_Bacteroidetes_40_14_curated
SCNpilot_bf_inoc_scaffold_297_curated_29
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(36916..37581)
DNA (666bp) protein (222aa)
Inorganic pyrophosphatase {ECO:0000313|EMBL:KJF43103.1}; EC=3.6.1.1 {ECO:0000313|EMBL:KJF43103.1};; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp. JN14CK-3.;"
Inorganic diphosphatase (EC:3.6.1.1); K01507 inorganic pyrophosphatase [EC:3.6.1.1]
inorganic pyrophosphatase id=4474439 bin=GWF2_Bacteroidetes_42_66 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
SCNpilot_bf_inoc_scaffold_297_curated_30
unknown

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comp(37636..37788)
DNA (153bp) protein (51aa)

This feature has no annotations

Displaying items 1-30 of 66 in total

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