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SCNpilot_bf_inoc_scaffold_272_curated

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Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_272_curated_1
unknown

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302..541
DNA (240bp) protein (80aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_272_curated_2
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(680..1267)
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Anaerophaga thermohalophila RepID=UPI000307B0B5
hypothetical protein
Tax=GWB2_Bacteroidetes_41_8_curated
SCNpilot_bf_inoc_scaffold_272_curated_3
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1902..4535
DNA (2634bp) protein (878aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000372894E
Alpha-rhamnosidase {ECO:0000313|EMBL:CEA16350.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
glycoside hydrolase
SCNpilot_bf_inoc_scaffold_272_curated_4
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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4548..7241
DNA (2694bp) protein (898aa)
alpha-L-rhamnosidase; K05989 alpha-L-rhamnosidase [EC:3.2.1.40]
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0003656A10
Alpha-L-rhamnosidase {ECO:0000313|EMBL:AHM58389.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
SCNpilot_bf_inoc_scaffold_272_curated_5
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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7257..9974
DNA (2718bp) protein (906aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035FE9AB
glycogen debranching protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_272_curated_6
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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10098..11972
DNA (1875bp) protein (625aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036E7192
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_272_curated_7
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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11991..13757
DNA (1767bp) protein (589aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036F4ED6
Alpha-L-rhamnosidase {ECO:0000313|EMBL:CEA16344.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
alpha-L-rhamnosidase
SCNpilot_bf_inoc_scaffold_272_curated_8
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

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13780..17034
DNA (3255bp) protein (1085aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000381D1A0
glycoside hydrolase
Tax=GWE2_Bacteroidetes_42_39_curated
SCNpilot_bf_inoc_scaffold_272_curated_9
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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17123..19909
DNA (2787bp) protein (929aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003789211
alpha-L-rhamnosidase
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_272_curated_10
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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19936..22662
DNA (2727bp) protein (909aa)
alpha-L-rhamnosidase N-terminal domain-containing protein; K05989 alpha-L-rhamnosidase [EC:3.2.1.40]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003748B0C
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_272_curated_11
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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22876..23721
DNA (846bp) protein (282aa)
Putative uncharacterized protein id=1939381 bin=GWD2_Bacteroidales_45_23 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_272_curated_12
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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23731..24903
DNA (1173bp) protein (391aa)
Cystathionine beta-lyase PatB {ECO:0000313|EMBL:CEA16031.1}; EC=4.4.1.8 {ECO:0000313|EMBL:CEA16031.1};; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
aminotransferase; K14155 cystathione beta-lyase [EC:4.4.1.8]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037A0523
SCNpilot_bf_inoc_scaffold_272_curated_13
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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24944..25516
DNA (573bp) protein (191aa)
peptidyl-prolyl cis-trans isomerase SlyD; K03775 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000360CA5A
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_272_curated_14
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

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25523..27640
DNA (2118bp) protein (706aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035FCD13
transporter, cpa2 family
Tax=BJP_IG2103_Bacteroidetes_41_9
SCNpilot_bf_inoc_scaffold_272_curated_15
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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27715..28788
DNA (1074bp) protein (358aa)
chorismate synthase (EC:4.2.3.5); K01736 chorismate synthase [EC:4.2.3.5]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035CBBF9
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_272_curated_16
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28767..31472)
DNA (2706bp) protein (902aa)
DNA topoisomerase IV subunit A; K02621 topoisomerase IV subunit A [EC:5.99.1.-]
Putative uncharacterized protein id=4805343 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_272_curated_17
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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31836..32750
DNA (915bp) protein (305aa)
Putative uncharacterized protein id=4805344 bin=GWC2_Bacteroidetes_46_850 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
peptidase M48, Ste24p
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_272_curated_18
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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32951..34384
DNA (1434bp) protein (478aa)
Aspartate ammonia-lyase {ECO:0000256|RuleBase:RU362017}; Short=Aspartase {ECO:0000256|RuleBase:RU362017};; EC=4.3.1.1 {ECO:0000256|RuleBase:RU362017};; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
aspartate ammonia-lyase (EC:4.3.1.1)
aspartate ammonia-lyase n=1 Tax=Alistipes sp. JC136 RepID=UPI000289C16D
SCNpilot_bf_inoc_scaffold_272_curated_19
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(34452..34907)
DNA (456bp) protein (152aa)
Uncharacterized protein id=1939378 bin=GWD2_Bacteroidales_45_23 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_272_curated_20
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(34917..35249)
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037EBF87
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_272_curated_21
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35296..36108)
DNA (813bp) protein (271aa)
Uncharacterized protein {ECO:0000313|EMBL:CEA16037.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
Lipoprotein id=4805374 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
hypothetical protein; K05807 putative lipoprotein
SCNpilot_bf_inoc_scaffold_272_curated_22
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36189..37700)
DNA (1512bp) protein (504aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000381156D
Uncharacterized protein {ECO:0000313|EMBL:CEA16038.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
GH3 auxin-responsive promoter
SCNpilot_bf_inoc_scaffold_272_curated_23
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(37721..38422)
DNA (702bp) protein (234aa)
Transcriptional regulator id=4805376 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
transcriptional regulator
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_272_curated_24
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38639..40798
DNA (2160bp) protein (720aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000371268B
Uncharacterized protein {ECO:0000313|EMBL:CEA16040.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_272_curated_25
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(40807..40965)
DNA (159bp) protein (53aa)
Putative uncharacterized protein id=4125725 bin=GWF2_Bacteroidetes_41_31 species=Pelodictyon phaeoclathratiforme genus=Pelodictyon taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_272_curated_26
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(40993..42450)
DNA (1458bp) protein (486aa)
Sulfide-quinone reductase, putative n=1 Tax=Chlorobium tepidum (strain ATCC 49652 / DSM 12025 / TLS) RepID=Q8KG51_CHLTE
sulfide-quinone reductase rbh
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_272_curated_27
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(42719..44707)
DNA (1989bp) protein (663aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003808D6D
phage shock protein C, PspC
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_272_curated_28
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(44704..45072)
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036AE5B0
transcriptional regulator, PadR family
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_272_curated_29
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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45425..47134
DNA (1710bp) protein (570aa)
Putative uncharacterized protein id=3591601 bin=GWC2_Bacteroidetes_46_850 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
peptidase, M23 family
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_272_curated_30
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(47146..48321)
DNA (1176bp) protein (392aa)
pncB; nicotinate phosphoribosyltransferase; K00763 nicotinate phosphoribosyltransferase [EC:2.4.2.11]
Nicotinate phosphoribosyltransferase id=3591604 bin=GWC2_Bacteroidetes_46_850 species=Porphyromonas gingivalis genus=Porphyromonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
Displaying items 1-30 of 50 in total

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