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SCNpilot_bf_inoc_scaffold_411_curated

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Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_411_curated_1
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1..141
DNA (141bp) protein (47aa)
oxidoreductase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003630BB8
dehydrogenase
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EFK63134.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
SCNpilot_bf_inoc_scaffold_411_curated_2
Bacteroides sp. CAG:598, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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353..3598
DNA (3246bp) protein (1082aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:598 RepID=R5C3S7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX62475.1}; TaxID=1262743 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:598.;"
Putative TonB dependent outer membrane exported protein
SCNpilot_bf_inoc_scaffold_411_curated_3
Bacteroides sp. CAG:598, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3607..5322
DNA (1716bp) protein (572aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:598 RepID=R5CFJ1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX62476.1}; TaxID=1262743 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:598.;"
outer membrane protein
SCNpilot_bf_inoc_scaffold_411_curated_4
Bacteroides sp. CAG:598, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5356..6486
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:598 RepID=R5CCE8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX62477.1}; TaxID=1262743 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:598.;"
putative lipoprotein
SCNpilot_bf_inoc_scaffold_411_curated_5
Bacteroides intestinalis CAG:315, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6709..8922
DNA (2214bp) protein (738aa)
Uncharacterized protein n=1 Tax=Bacteroides intestinalis CAG:315 RepID=R7E050_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD96095.1}; TaxID=1263048 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides intestinalis CAG:315.;"
coagulation factor 5/8 type domain protein
SCNpilot_bf_inoc_scaffold_411_curated_6
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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8940..10460
DNA (1521bp) protein (507aa)
Putative uncharacterized protein n=2 Tax=Dysgonomonas RepID=F8X2N7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05727.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
large exoprotein involved in heme utilization or adhesion
SCNpilot_bf_inoc_scaffold_411_curated_7
Bacteroides oleiciplenus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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10560..11606
DNA (1047bp) protein (349aa)
inosine/uridine-preferring nucleoside hydrolase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000366F17E
Uncharacterized protein {ECO:0000313|EMBL:EKU90934.1}; TaxID=742727 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides oleiciplenus YIT 12058.;"
inosine/uridine-preferring nucleoside hydrolase
SCNpilot_bf_inoc_scaffold_411_curated_8
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

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11748..12677
DNA (930bp) protein (310aa)
ribokinase; K00852 ribokinase [EC:2.7.1.15]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003807219
Tax=GWE2_Bacteroidetes_42_39_curated
SCNpilot_bf_inoc_scaffold_411_curated_9
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

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12689..13690
DNA (1002bp) protein (334aa)
Sugar transport family protein id=1840534 bin=GWE2_Bacteroidetes_42_39 species=Leadbetterella byssophila genus=Leadbetterella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
sugar transport family protein; K05340 glucose uptake protein
Tax=GWE2_Bacteroidetes_42_39_curated
SCNpilot_bf_inoc_scaffold_411_curated_10
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(13568..14290)
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000361C983
Rhomboid family protein {ECO:0000313|EMBL:CEA16289.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
peptidase s54, rhomboid domain protein
SCNpilot_bf_inoc_scaffold_411_curated_11
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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14484..16424
DNA (1941bp) protein (647aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037F69A2
Putative glycogen debranching enzyme, type {ECO:0000313|EMBL:CEA16290.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
4-alpha-glucanotransferase
SCNpilot_bf_inoc_scaffold_411_curated_12
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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16468..17724
DNA (1257bp) protein (419aa)
4-alpha-glucanotransferase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000363BC40
Uncharacterized protein {ECO:0000313|EMBL:CEA16291.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
glycosyltransferase rbh
SCNpilot_bf_inoc_scaffold_411_curated_13
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17759..19087
DNA (1329bp) protein (443aa)
alpha-glycosidase; K07405 alpha-amylase [EC:3.2.1.1]
Uncharacterized protein {ECO:0000313|EMBL:CEA16292.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
Putative uncharacterized protein id=1931549 bin=GWD2_Bacteroidales_45_23 species=Tannerella sp. 6_1_58FAA_CT1 genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
SCNpilot_bf_inoc_scaffold_411_curated_14
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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19177..20607
DNA (1431bp) protein (477aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2BC45_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EOS14340.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
Na+/H+ antiporter NhaD-like protein
SCNpilot_bf_inoc_scaffold_411_curated_15
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20773..21204
DNA (432bp) protein (144aa)
Transcriptional regulator, BadM/Rrf2 family n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7R5_PALPW
Uncharacterized protein {ECO:0000313|EMBL:CEA16226.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
transcriptional regulator, badm/rrf2 family
SCNpilot_bf_inoc_scaffold_411_curated_16
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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21432..22022
DNA (591bp) protein (197aa)
YceI family protein id=4483758 bin=GWC2_Bacteroidetes_46_850 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
ycei family protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_411_curated_17
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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22257..23597
DNA (1341bp) protein (447aa)
Putative uncharacterized protein id=1731165 bin=GWD2_Bacteroidales_45_23 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_411_curated_18
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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23603..24241
DNA (639bp) protein (213aa)
YceI family protein id=4483754 bin=GWC2_Bacteroidetes_46_850 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
ycei family protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_411_curated_19
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(24249..24713)
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036F494A
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_411_curated_20
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24703..25908)
DNA (1206bp) protein (402aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000365A541
Uncharacterized protein {ECO:0000313|EMBL:CEA15165.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
Uncharacterized homolog of PSP1
SCNpilot_bf_inoc_scaffold_411_curated_21
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(26007..27116)
DNA (1110bp) protein (370aa)
DNA polymerase III subunit delta; K02341 DNA polymerase III subunit delta' [EC:2.7.7.7]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000367C6F5
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_411_curated_22
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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27539..28087
DNA (549bp) protein (183aa)
Putative phosphate transport regulator n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8G8_PALPW
phosphate transport regulator; K07220 hypothetical protein
Putative phosphate transport regulator {ECO:0000313|EMBL:ADQ81012.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_411_curated_23
Bacteroides cellulosilyticus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28123..29154
DNA (1032bp) protein (344aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I8VVT8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY30550.1}; TaxID=997874 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides cellulosilyticus CL02T12C19.;"
phosphate transporter; K03306 inorganic phosphate transporter, PiT family
SCNpilot_bf_inoc_scaffold_411_curated_24
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(29161..30111)
DNA (951bp) protein (317aa)
5,10-methylenetetrahydrofolate reductase; K00297 methylenetetrahydrofolate reductase (NADPH) [EC:1.5.1.20]
Methylenetetrahydrofolate reductase id=1885216 bin=GWD2_Bacteroidales_45_23 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_411_curated_25
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30173..31495)
DNA (1323bp) protein (441aa)
membrane-associated zinc metalloprotease; K11749 regulator of sigma E protease [EC:3.4.24.-]
RIP metalloprotease RseP id=4595940 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_411_curated_26
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(31520..32749)
DNA (1230bp) protein (410aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae;
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267); K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003664D73
SCNpilot_bf_inoc_scaffold_411_curated_27
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(32746..33270)
DNA (525bp) protein (175aa)
Ribosome maturation factor RimM id=1885220 bin=GWD2_Bacteroidales_45_23 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
Ribosome maturation factor rimM; K02860 16S rRNA processing protein RimM
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_411_curated_28
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(33274..33879)
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000369733D
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_411_curated_29
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(33904..34827)
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037698F1
glycoside hydrolase
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_411_curated_30
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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34864..35373
DNA (510bp) protein (170aa)
Putative uncharacterized protein id=4595860 bin=GWC2_Bacteroidetes_46_850 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
cytidine deaminase, homotetrameric
Tax=GWC2_Bacteroidetes_46_850_curated
Displaying items 1-30 of 40 in total

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