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SCNpilot_bf_inoc_scaffold_1144_curated

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_1144_curated_1
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(59..1309)
DNA (1251bp) protein (417aa)
Nickel resistance id=2119544 bin=GWD2_Bacteroidales_45_23 species=Chryseobacterium gleum genus=Chryseobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein; K07785 MFS transporter, NRE family, putaive nickel resistance protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_1144_curated_2
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

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comp(1323..2498)
DNA (1176bp) protein (392aa)
Uncharacterized protein id=1768109 bin=GWE2_Bacteroidetes_40_15 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein
Tax=BJP_08E140C01_Bacteroidetes_41_49
SCNpilot_bf_inoc_scaffold_1144_curated_3
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

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comp(2479..5577)
DNA (3099bp) protein (1033aa)
Cation efflux transporter id=1768111 bin=GWE2_Bacteroidetes_40_15 species=unknown genus=unknown taxon_order=unknown taxon_class=Planctomycetia phylum=Planctomycetes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
CzcA family heavy metal efflux pump
Tax=BJP_08E140C01_Bacteroidetes_41_49
SCNpilot_bf_inoc_scaffold_1144_curated_4
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

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comp(5591..7093)
DNA (1503bp) protein (501aa)
Similar to cobalt-zinc-cadmium resistance protein CzcB id=1768113 bin=GWE2_Bacteroidetes_40_15 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
RND family efflux transporter MFP subunit
Tax=BJP_08E140C01_Bacteroidetes_41_49
SCNpilot_bf_inoc_scaffold_1144_curated_5
unknown

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comp(7106..7345)
DNA (240bp) protein (80aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1144_curated_6
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

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comp(7444..7890)
DNA (447bp) protein (149aa)
Tax=BJP_08E140C01_Bacteroidetes_41_49
SCNpilot_bf_inoc_scaffold_1144_curated_7
Odoribacter laneus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7937..9238)
DNA (1302bp) protein (434aa)
Putative uncharacterized protein n=1 Tax=Odoribacter laneus YIT 12061 RepID=H1DGD4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EHP48122.1}; TaxID=742817 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter laneus YIT 12061.;"
mobilization protein
SCNpilot_bf_inoc_scaffold_1144_curated_8
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9412..10305)
DNA (894bp) protein (298aa)
Putative uncharacterized protein n=1 Tax=Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338) RepID=G8UMW7_TANFA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW21861.1}; TaxID=203275 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338); (Bacteroides forsythus).;"
SCNpilot_bf_inoc_scaffold_1144_curated_9
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(10543..11772)
DNA (1230bp) protein (410aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000363FCF5
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_1144_curated_10
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(11723..12028)
DNA (306bp) protein (102aa)
Uncharacterized protein id=2555043 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_1144_curated_11
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(12172..12894)
DNA (723bp) protein (241aa)
Uncharacterized protein id=1903831 bin=GWD2_Bacteroidales_45_23 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_1144_curated_12
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12903..14462)
DNA (1560bp) protein (520aa)
transcriptional regulator; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12]
Putative transcriptional regulator id=1903829 bin=GWD2_Bacteroidales_45_23 species=Capnocytophaga gingivalis genus=Capnocytophaga taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_1144_curated_13
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14497..15900)
DNA (1404bp) protein (468aa)
Site-specific recombinase XerD id=1903826 bin=GWD2_Bacteroidales_45_23 species=unknown genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
site-specific recombinase XerD
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_1144_curated_14
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

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comp(16052..17629)
DNA (1578bp) protein (526aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I8WU27_BACFG
resolvase domain-containing protein
Tax=BJP_IG2069_Bacteroidetes_43_11
SCNpilot_bf_inoc_scaffold_1144_curated_15
unknown

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19146..20516
DNA (1371bp) protein (457aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1144_curated_16
Prosthecochloris aestuarii, Prosthecochloris, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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20648..20935
DNA (288bp) protein (96aa)
Transposase IS3/IS911 family protein n=1 Tax=Prosthecochloris aestuarii (strain DSM 271 / SK 413) RepID=B4S6V9_PROA2
transposase IS3/IS911 family protein
Transposase IS3/IS911 family protein {ECO:0000313|EMBL:ACF47314.1}; TaxID=290512 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Prosthecochloris.;" source="Prosthecochloris aestuarii (strain DSM 271 / SK 413).;"
SCNpilot_bf_inoc_scaffold_1144_curated_17
CG_Elusi_05, Elusimicrobia, Bacteria

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20911..21771
DNA (861bp) protein (287aa)
Integrase id=3126143 bin=GWF2_Bacteroidetes_41_31 species=Gramella forsetii genus=Gramella taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
integrase catalytic region; K07497 putative transposase
Tax=CG_Elusi_05
Displaying 17 items

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