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SCNpilot_bf_inoc_scaffold_1516_curated_1

Organism: scnpilot_dereplicated_Bacteroidia_1

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: 215..841

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Prevotella multisaccharivorax DSM 17128 RepID=F8NAK9_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 45.9
  • Coverage: 207.0
  • Bit_score: 182
  • Evalue 4.90e-43
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EGN55809.1}; TaxID=688246 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella multisaccharivorax DSM 17128.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.9
  • Coverage: 207.0
  • Bit_score: 182
  • Evalue 6.90e-43
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 45.4
  • Coverage: 207.0
  • Bit_score: 176
  • Evalue 8.50e-42

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Taxonomy

Prevotella multisaccharivorax → Prevotella → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 627
ATGAAAGAAAAATATGCAGCGGATAATTTCTGGCAGAAATTTTTAGACGGTCAGGACGATTATGAAGCATTTTCCCGTATATACAATTTGTATATAAACGATTTGCTTTCATACGGCATAAGTTTTGGATTTGCAGAGGAAACTTGCCGGGATGCCGCTCATGATCTGTTTTTCAAGATCTATACCGAAAAGAACAGACTCTCTTCTGTAAAAAACCCCACATCGTATCTGTTCAGAAGCTTCAGAAACCATTTGTTCAATATTCAAAAGCGACAGAATAGATTATCTCCCGATCTTACGCTCGAAAAATCCGCTTTCACTACCGAAATAACCATTCTCGATTCCATGATCAGTGAAGAGGAAACCCAAAAACTCAAAAGAATCGTAGAAGATTTATTAAAAGAACTCACCCCCCGCCAACGGGAAGCCATCTACTTGAGGTATATGCAGGAAATGGATTACGAAGATATTGCAGTACTTCTGGATATGAACGTCAATTCGGCAAGAAGGCTTGTGTCGAGGGGTATTGATAGCTTAAGGGATAAAACCTTAAACATGGGTAACGACTCCCTCACCGTATTAATTTTCCTGTTGGCTGCATATATAAAAGAAAACCTGTCCCTGTAA
PROTEIN sequence
Length: 209
MKEKYAADNFWQKFLDGQDDYEAFSRIYNLYINDLLSYGISFGFAEETCRDAAHDLFFKIYTEKNRLSSVKNPTSYLFRSFRNHLFNIQKRQNRLSPDLTLEKSAFTTEITILDSMISEEETQKLKRIVEDLLKELTPRQREAIYLRYMQEMDYEDIAVLLDMNVNSARRLVSRGIDSLRDKTLNMGNDSLTVLIFLLAAYIKENLSL*