ggKbase home page

SCNpilot_bf_inoc_scaffold_1516_curated

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_1516_curated_1
Prevotella multisaccharivorax, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

215..841
DNA (627bp) protein (209aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Prevotella multisaccharivorax DSM 17128 RepID=F8NAK9_9BACT
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EGN55809.1}; TaxID=688246 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella multisaccharivorax DSM 17128.;"
sigma-70 family RNA polymerase sigma factor
SCNpilot_bf_inoc_scaffold_1516_curated_2
Prevotella histicola, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

855..2120
DNA (1266bp) protein (422aa)
Putative uncharacterized protein n=1 Tax=Prevotella histicola F0411 RepID=G6AIU6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EHG15415.1}; TaxID=857291 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella histicola F0411.;"
FecR/PupR family sigma factor regulatory protein
SCNpilot_bf_inoc_scaffold_1516_curated_3
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2235..5828
DNA (3594bp) protein (1198aa)
TonB-linked outer membrane protein, SusC/RagA family id=1794397 bin=GWE2_Bacteroidetes_42_39 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
TonB-dependent receptor plug
Tax=GWE2_Bacteroidetes_42_39_curated
SCNpilot_bf_inoc_scaffold_1516_curated_4
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5850..7658
DNA (1809bp) protein (603aa)
Uncharacterized protein id=1794393 bin=GWE2_Bacteroidetes_42_39 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
ragb/susd domain protein
Tax=GWE2_Bacteroidetes_42_39_curated
SCNpilot_bf_inoc_scaffold_1516_curated_5
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7761..8555
DNA (795bp) protein (265aa)
Putative uncharacterized protein id=4706568 bin=GWA2_Bacteroidetes_42_15 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
metal-dependent hydrolase
Tax=GWE2_Bacteroidetes_42_39_curated
SCNpilot_bf_inoc_scaffold_1516_curated_6
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8650..9138
DNA (489bp) protein (163aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2B885_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB56127.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1516_curated_7
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9396..10046
DNA (651bp) protein (217aa)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
carbonate dehydratase (EC:4.2.1.1); K01673 carbonic anhydrase [EC:4.2.1.1]
carbonate dehydratase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003749901
SCNpilot_bf_inoc_scaffold_1516_curated_8
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10093..11427
DNA (1335bp) protein (445aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WWJ6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK06330.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
dbpA; ATP-dependent RNA helicase DbpA
SCNpilot_bf_inoc_scaffold_1516_curated_9
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

11638..12234
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037AF41D
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
Displaying 9 items

View Taxonomy