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SCNpilot_bf_inoc_scaffold_616_curated_26

Organism: scnpilot_dereplicated_Bacteroidia_1

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(18693..19223)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 family RNA polymerase sigma factor id=3504037 bin=GWC2_Bacteroidetes_46_850 species=Odoribacter laneus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes similarity UNIREF
DB: UNIREF100
  • Identity: 75.4
  • Coverage: 175.0
  • Bit_score: 259
  • Evalue 2.70e-66
rpoE; protein RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 38.5
  • Coverage: 182.0
  • Bit_score: 140
  • Evalue 4.40e-31
Tax=GWC2_Bacteroidetes_46_850_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 75.4
  • Coverage: 175.0
  • Bit_score: 259
  • Evalue 3.80e-66

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Taxonomy

GWC2_Bacteroidetes_46_850_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 531
ATGTCGGACGAACAACTCATATACAAAATAAATTCGAGCGATCCCTCTGCCTTTAAAATGCTGATGGAAAAATACCAATTGCAGGTGTTTCGAACCGTTATGGGATTTGTTCACTCGAAAGAAGATGCTGAGGATATCACGCAGGATATTTTTGTGAAGGTGTATCAGTCGCTCGCATCTTTCAAAGGAGAATCGGAGTTTTCCACATGGCTTTACAGAATCACCGTGAACATGAGCATAAATTTCGTCAATCGAAATCGTAAAAACCGGTTGCTCCAATCCCTCGAAGATATTTTCACCAAACCGGGCAACGAGAAAACACCGCTGGAACAACTGGAAGAGTCGGAACGTGATCGGCGTATTCAAAAAGCTATCGATTCATTGACCGAAAGACAACGAATGGCTTTTATTTTAAGTAAATACGAAGAACTTTCTCAAAAAACGATCGCTTCGGTGATGAATACATCGGAAGGCGCTGTGGAACAACTGTTACAAAGAGCAAAAAACAATTTACAAAGAAAATTAAGCTGA
PROTEIN sequence
Length: 177
MSDEQLIYKINSSDPSAFKMLMEKYQLQVFRTVMGFVHSKEDAEDITQDIFVKVYQSLASFKGESEFSTWLYRITVNMSINFVNRNRKNRLLQSLEDIFTKPGNEKTPLEQLEESERDRRIQKAIDSLTERQRMAFILSKYEELSQKTIASVMNTSEGAVEQLLQRAKNNLQRKLS*