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SCNpilot_bf_inoc_scaffold_616_curated

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_616_curated_1
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(102..287)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D2 RepID=I0PY80_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIC71875.1}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
SCNpilot_bf_inoc_scaffold_616_curated_2
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(284..463)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D2 RepID=I0PY81_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIC71876.1}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
SCNpilot_bf_inoc_scaffold_616_curated_3
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(519..2264)
DNA (1746bp) protein (582aa)
ParB-like partition protein n=1 Tax=Bacteroides sp. D2 RepID=E5C648_9BACE
ParB-like partition protein {ECO:0000313|EMBL:EFS29511.1}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
ParB-like partition proteins
SCNpilot_bf_inoc_scaffold_616_curated_4
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2285..2503)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D2 RepID=E5C647_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFS29510.1}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_616_curated_5
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2505..2717)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D2 RepID=I0PY82_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIC71877.1}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
SCNpilot_bf_inoc_scaffold_616_curated_6
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2730..2969)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D2 RepID=I0PY83_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIC71878.1}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_616_curated_7
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3458..3754
DNA (297bp) protein (99aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IX12_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK02359.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_616_curated_8
Bacteroides salanitronis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3747..4067
DNA (321bp) protein (107aa)
DNA binding domain protein, excisionase family n=1 Tax=Bacteroides salanitronis (strain DSM 18170 / JCM 13567 / BL78) RepID=F0R7L9_BACSH
DNA binding domain-containing protein
DNA binding domain protein, excisionase family {ECO:0000313|EMBL:ADY34926.1}; TaxID=667015 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salanitronis (strain DSM 18170 / JCM 13567 / BL78).;"
SCNpilot_bf_inoc_scaffold_616_curated_9
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4128..5363)
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 3_2_5 RepID=C6I6C2_9BACE
Phage integrase family protein {ECO:0000313|EMBL:EXY70268.1}; TaxID=1339287 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3986 T(B)9.;"
tyrosine type site-specific recombinase rbh
SCNpilot_bf_inoc_scaffold_616_curated_10
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5828..7912)
DNA (2085bp) protein (695aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000379A779
wd40-like beta propeller containing protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_616_curated_11
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7941..8606)
DNA (666bp) protein (222aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708};; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
lipoprotein releasing system ATP-binding protein; K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037B10A0
SCNpilot_bf_inoc_scaffold_616_curated_12
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8775..9413
DNA (639bp) protein (213aa)
Pyridoxine/pyridoxamine 5'-phosphate oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; EC=1.4.3.5 {ECO:0000256|HAMAP-Rule:MF_01629};; PNP/PMP oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; Pyridoxal 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_01629}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
pyridoxamine 5'-phosphate oxidase (EC:1.4.3.5); K00275 pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
Pyridoxine/pyridoxamine 5'-phosphate oxidase id=1931539 bin=GWD2_Bacteroidales_45_23 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
SCNpilot_bf_inoc_scaffold_616_curated_13
unknown

Not on your lists

9823..9945
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_616_curated_14
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10008..10766
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003791F98
Uncharacterized protein {ECO:0000313|EMBL:CEA15311.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
transcriptional regulator, GntR family
SCNpilot_bf_inoc_scaffold_616_curated_15
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10831..11892)
DNA (1062bp) protein (354aa)
Putative uncharacterized protein id=2063353 bin=GWD2_Bacteroidales_45_23 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_616_curated_16
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11892..12170)
DNA (279bp) protein (93aa)
Putative transcriptional regulator id=2162179 bin=GWE2_Bacteroidetes_29_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_29_8 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_616_curated_17
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12189..13919)
DNA (1731bp) protein (577aa)
4Fe-4S ferredoxin iron-sulfur binding protein n=1 Tax=uncultured bacterium RepID=K1Y0G2_9BACT
hypothetical protein
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_616_curated_18
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

comp(13916..15223)
DNA (1308bp) protein (436aa)
Heterodisulfide reductase, subunit A id=4607882 bin=GWF2_Bacteroidetes_29_10 species=Vulcanisaeta moutnovskia genus=Vulcanisaeta taxon_order=Thermoproteales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWF2_Bacteroidetes_29_10 organism_group=Bacteroidetes
hypothetical protein
Tax=CG_Bacteroid_01
SCNpilot_bf_inoc_scaffold_616_curated_19
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15230..15625)
DNA (396bp) protein (132aa)
Methyl-viologen-reducing hydrogenase delta subunit id=4607881 bin=GWF2_Bacteroidetes_29_10 species=Desulfotomaculum gibsoniae genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Bacteroidetes_29_10 organism_group=Bacteroidetes
hypothetical protein
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_616_curated_20
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

comp(15640..15891)
DNA (252bp) protein (84aa)
UPI00020A9A54 related cluster id=4607880 bin=GWF2_Bacteroidetes_29_10 species=Thermodesulfobium narugense genus=Thermodesulfobium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Bacteroidetes_29_10 organism_group=Bacteroidetes
hypothetical protein
Tax=CG_Bacteroid_01
SCNpilot_bf_inoc_scaffold_616_curated_21
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15992..16558)
DNA (567bp) protein (189aa)
Uncharacterized protein id=2063367 bin=GWD2_Bacteroidales_45_23 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_616_curated_22
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16763..17368
DNA (606bp) protein (202aa)
Crp/Fnr family transcriptional regulator id=2063370 bin=GWD2_Bacteroidales_45_23 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_616_curated_23
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17374..17748)
DNA (375bp) protein (125aa)
hypothetical protein AnHS1_08358 id=2063288 bin=GWD2_Bacteroidales_45_23 species=unknown genus=Eggerthella taxon_order=Coriobacteriales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_616_curated_24
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17791..18354)
DNA (564bp) protein (188aa)
hypothetical protein MsalJ2_01717 id=2063291 bin=GWD2_Bacteroidales_45_23 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_616_curated_25
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18347..18640)
DNA (294bp) protein (98aa)
id=2063294 bin=GWD2_Bacteroidales_45_23 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_616_curated_26
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18693..19223)
DNA (531bp) protein (177aa)
Sigma-70 family RNA polymerase sigma factor id=3504037 bin=GWC2_Bacteroidetes_46_850 species=Odoribacter laneus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
rpoE; protein RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_616_curated_27
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19404..19991
DNA (588bp) protein (196aa)
Transcriptional regulator, TetR family id=2565735 bin=GWC2_Bacteroidetes_46_850 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
TetR family transcriptional regulator
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_616_curated_28
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20203..21723
DNA (1521bp) protein (507aa)
ATP synthase f1, beta subunit; K02112 F-type H+-transporting ATPase subunit beta [EC:3.6.3.14]
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
F0F1 ATP synthase subunit beta n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036DD4CA
SCNpilot_bf_inoc_scaffold_616_curated_29
Bacteroides salyersiae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21770..21994
DNA (225bp) protein (75aa)
ATP synthase F1 subunit epsilon; K02114 F-type H+-transporting ATPase subunit epsilon [EC:3.6.3.14]
ATP synthase F1, epsilon subunit n=3 Tax=Bacteroides RepID=I9T0N2_9BACE
ATP synthase F1, epsilon subunit {ECO:0000313|EMBL:EIY62133.1}; TaxID=997887 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salyersiae CL02T12C01.;"
SCNpilot_bf_inoc_scaffold_616_curated_30
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21964..22428
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036AEF41
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
Displaying items 1-30 of 40 in total

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