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SCNpilot_bf_inoc_scaffold_1562_curated

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_1562_curated_1
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3..608
DNA (606bp) protein (202aa)
Sugar phosphate isomerase/epimerase n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IPQ6_9BACE
Sugar phosphate isomerase/epimerase {ECO:0000313|EMBL:CEA16175.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
sugar phosphate isomerase/epimerase
SCNpilot_bf_inoc_scaffold_1562_curated_2
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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640..1482
DNA (843bp) protein (281aa)
Endonuclease/exonuclease/phosphatase n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QQF9_SPILD
endonuclease/exonuclease/phosphatase; K06896
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:ADB40740.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_bf_inoc_scaffold_1562_curated_3
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

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1490..3019
DNA (1530bp) protein (510aa)
Uncharacterized protein id=3921893 bin=GWF2_Bacteroidetes_41_9 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_9 organism_group=Bacteroidetes
hypothetical protein
Tax=GWA2_Bacteroidetes_40_15_curated
SCNpilot_bf_inoc_scaffold_1562_curated_4
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

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3075..4178
DNA (1104bp) protein (368aa)
Putative uncharacterized protein id=4324631 bin=GWA2_Bacteroidetes_42_15 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
hypothetical protein
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
SCNpilot_bf_inoc_scaffold_1562_curated_5
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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4325..5275
DNA (951bp) protein (317aa)
metallophosphoesterase n=1 Tax=Pedobacter agri RepID=UPI00029A399B
Metallophosphoesterase {ECO:0000313|EMBL:EOR94308.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
yvnB; metallophosphoesterase
SCNpilot_bf_inoc_scaffold_1562_curated_6
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

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5286..6383
DNA (1098bp) protein (366aa)
Putative uncharacterized protein id=4324631 bin=GWA2_Bacteroidetes_42_15 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
hypothetical protein
Tax=GWE2_Bacteroidetes_42_39_curated
SCNpilot_bf_inoc_scaffold_1562_curated_7
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

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6408..8000
DNA (1593bp) protein (531aa)
Uncharacterized protein id=4299030 bin=GWF2_Bacteroidetes_42_66 species=Bacteroides sp. D2 genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
coagulation factor 5/8 type domain-containing protein
Tax=GWE2_Bacteroidetes_42_39_curated
SCNpilot_bf_inoc_scaffold_1562_curated_8
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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8038..9972
DNA (1935bp) protein (645aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZKF7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN16224.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1562_curated_9
Prevotella sp. CAG:474, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9987..11861
DNA (1875bp) protein (625aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI00036FA7A0
Uncharacterized protein {ECO:0000313|EMBL:CDC99177.1}; TaxID=1262926 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:474.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1562_curated_10
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

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12188..14749
DNA (2562bp) protein (854aa)
Glycoside hydrolase family 2 sugar binding protein id=2163643 bin=GWE2_Bacteroidetes_41_25 species=Cyclobacterium marinum genus=Cyclobacterium taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_41_25 organism_group=Bacteroidetes organism_desc=Good
glycoside hydrolase
Tax=GWA2_Bacteroidetes_40_15_curated
SCNpilot_bf_inoc_scaffold_1562_curated_11
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

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14804..15886
DNA (1083bp) protein (361aa)
Putative uncharacterized protein id=1881781 bin=GWE2_Bacteroidetes_42_39 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein
Tax=GWE2_Bacteroidetes_42_39_curated
SCNpilot_bf_inoc_scaffold_1562_curated_12
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

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15919..17145
DNA (1227bp) protein (409aa)
Putative lipoprotein id=4567659 bin=GWC2_Bacteroidetes_40_22 species=Tannerella forsythia genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes
putative lipoprotein
Tax=GWA2_Bacteroidetes_40_15_curated
SCNpilot_bf_inoc_scaffold_1562_curated_13
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(17747..19219)
DNA (1473bp) protein (491aa)
L-fucose isomerase-like protein; K01804 L-arabinose isomerase [EC:5.3.1.4]
L-arabinose isomerase {ECO:0000256|SAAS:SAAS00093763}; EC=5.3.1.4 {ECO:0000256|SAAS:SAAS00093763};; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus; marinus).;"
L-fucose isomerase-like protein n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J628_CYCMS
SCNpilot_bf_inoc_scaffold_1562_curated_14
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(19212..20495)
DNA (1284bp) protein (428aa)
Putative uncharacterized protein id=4541367 bin=GWA2_Bacteroidetes_42_15 species=Parabacteroides johnsonii genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
major facilitator superfamily protein
Tax=GWE2_Bacteroidetes_42_39_curated
SCNpilot_bf_inoc_scaffold_1562_curated_15
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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20609..21367
DNA (759bp) protein (253aa)
Transcriptional regulator, GntR family n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7B5P4_9PORP
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EEC98274.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
transcriptional regulator
Displaying 15 items

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