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SCNpilot_bf_inoc_scaffold_1022_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_1022_curated_1
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(111..2837)
DNA (2727bp) protein (909aa)
alpha-L-rhamnosidase N-terminal domain-containing protein; K05989 alpha-L-rhamnosidase [EC:3.2.1.40]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003748B0C
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_1022_curated_2
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2973..4472)
DNA (1500bp) protein (500aa)
Two component regulator propeller n=1 Tax=Bacteroides sp. 4_1_36 RepID=E5V5Y5_9BACE
Two component regulator propeller {ECO:0000313|EMBL:EFV27770.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
histidine kinase
SCNpilot_bf_inoc_scaffold_1022_curated_3
unknown

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6549..6800
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1022_curated_4
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7324..8979
DNA (1656bp) protein (552aa)
Carboxylic ester hydrolase; EC=3.1.1.-;; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
Carboxylesterase type B; K03929 para-nitrobenzyl esterase [EC:3.1.1.-]
Carboxylesterase n=1 Tax=Bacteroides uniformis CAG:3 RepID=R7EH69_9BACE
SCNpilot_bf_inoc_scaffold_1022_curated_5
Bacteroides graminisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9107..12175
DNA (3069bp) protein (1023aa)
TonB-linked outer membrane protein n=1 Tax=Prevotella paludivivens RepID=UPI00037CF237
TonB-dependent receptor {ECO:0000313|EMBL:GAK37493.1}; TaxID=1121097 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides graminisolvens DSM 19988 = JCM 15093.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1022_curated_6
Bacteroides graminisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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12200..13771
DNA (1572bp) protein (524aa)
glycan metabolism protein RagB n=1 Tax=Prevotella oris RepID=UPI00036ACF2E
Outer membrane protein {ECO:0000313|EMBL:GAK37494.1}; TaxID=1121097 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides graminisolvens DSM 19988 = JCM 15093.;"
lipoprotein
SCNpilot_bf_inoc_scaffold_1022_curated_7
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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15320..16312
DNA (993bp) protein (331aa)
glucan 1,4-beta-glucosidase (EC:3.2.1.74)
Uncharacterized protein n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9I4D6_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EOS11059.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
SCNpilot_bf_inoc_scaffold_1022_curated_8
Bacteroides intestinalis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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16405..17289
DNA (885bp) protein (295aa)
Putative esterase n=1 Tax=Bacteroides intestinalis DSM 17393 RepID=B3CET1_9BACE
Putative esterase {ECO:0000313|EMBL:EDV05069.1}; TaxID=471870 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides intestinalis DSM 17393.;"
esterase
SCNpilot_bf_inoc_scaffold_1022_curated_9
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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17322..18512
DNA (1191bp) protein (397aa)
Putative esterase n=2 Tax=Bacteroides RepID=D2EWE3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFV27763.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
esterase; K07214 enterochelin esterase and related enzymes
SCNpilot_bf_inoc_scaffold_1022_curated_10
Bacteroides oleiciplenus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(18585..18944)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Bacteroides oleiciplenus YIT 12058 RepID=K9EEX8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKU87720.1}; TaxID=742727 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides oleiciplenus YIT 12058.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1022_curated_11
unknown

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comp(21288..21428)
DNA (141bp) protein (47aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1022_curated_12
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(22930..23262)
DNA (333bp) protein (111aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0WQK8_9PORP
hypothetical protein; K09951 CRISPR-associated protein Cas2
SCNpilot_bf_inoc_scaffold_1022_curated_13
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(23281..24216)
DNA (936bp) protein (312aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
CRISPR-associated endonuclease Cas1 n=1 Tax=Bacteroides sp. CAG:20 RepID=R5F4I8_9BACE
hypothetical protein; K15342 CRISP-associated protein Cas1
SCNpilot_bf_inoc_scaffold_1022_curated_14
Bacteroides eggerthii CAG:109, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(24213..28778)
DNA (4566bp) protein (1522aa)
CRISPR-associated endonuclease Cas9 {ECO:0000256|HAMAP-Rule:MF_01480}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01480};; TaxID=1263043 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides eggerthii CAG:109.;"
Uncharacterized protein n=1 Tax=Bacteroides eggerthii CAG:109 RepID=R5K6G6_9BACE
csn1; CRISPR-associated protein, Csn1 family
Displaying 14 items

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