ggKbase home page

SCNpilot_bf_inoc_scaffold_4364_curated

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_4364_curated_1
RIFOXYB2_FULL_RIF07_49_35_curated, RIF7, Bacteria

Not on your lists

1..270
DNA (270bp) protein (90aa)
aminotransferase class V n=1 Tax=Thermophagus xiamenensis RepID=UPI000255CDB5
cysteine desulfurase
Tax=RIFOXYB2_FULL_RIF07_49_35_curated
SCNpilot_bf_inoc_scaffold_4364_curated_2
unknown

Not on your lists

254..484
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Anaerophaga thermohalophila RepID=UPI0003712ACB
SCNpilot_bf_inoc_scaffold_4364_curated_3
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

465..1514
DNA (1050bp) protein (350aa)
selD; selenide, water dikinase; K01008 selenide, water dikinase [EC:2.7.9.3] rbh
segregation protein B n=1 Tax=Porphyromonas gulae RepID=UPI00035C7A6A
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_4364_curated_4
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

1584..1979
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0KA48_9BACT
yuxK; putative protein yuxK ORF2
Uncharacterized protein {ECO:0000313|EMBL:CCH01001.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
SCNpilot_bf_inoc_scaffold_4364_curated_5
unknown

Not on your lists

comp(2250..2714)
DNA (465bp) protein (155aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_4364_curated_6
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3361..4167
DNA (807bp) protein (269aa)
hypothetical protein; K01843 lysine 2,3-aminomutase [EC:5.4.3.2]
KamA family protein n=3 Tax=Parabacteroides RepID=K5Z6G1_9PORP
KamA family protein {ECO:0000313|EMBL:KKB49348.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
SCNpilot_bf_inoc_scaffold_4364_curated_7
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4214..4753
DNA (540bp) protein (180aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=B7B9C8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEC96965.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
ferredoxin domain-containing protein
SCNpilot_bf_inoc_scaffold_4364_curated_8
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4874..5494)
DNA (621bp) protein (207aa)
Histone-like bacterial DNA-binding protein n=1 Tax=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) RepID=Q8A060_BACTN
hypothetical protein
Histone-like bacterial DNA-binding protein {ECO:0000313|EMBL:AAO79266.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
SCNpilot_bf_inoc_scaffold_4364_curated_9
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5826..7859
DNA (2034bp) protein (678aa)
VirE N-terminal domain protein n=1 Tax=Bacteroides fragilis 3_1_12 RepID=E4W0W3_BACFG
VirE N-terminal domain protein {ECO:0000313|EMBL:EFR55568.1}; TaxID=457424 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis 3_1_12.;"
helicase rbh
SCNpilot_bf_inoc_scaffold_4364_curated_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8066..11311)
DNA (3246bp) protein (1082aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_30 RepID=F7M268_9BACE
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:EIY78554.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
SCNpilot_bf_inoc_scaffold_4364_curated_11
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11323..11526)
DNA (204bp) protein (68aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IX88_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK02435.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
putative DNA-binding protein
SCNpilot_bf_inoc_scaffold_4364_curated_12
unknown

Not on your lists

comp(12010..12252)
DNA (243bp) protein (81aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_4364_curated_13
Parabacteroides sp. CAG:409, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12290..12550
DNA (261bp) protein (87aa)
Alpha-mannosidase n=1 Tax=Parabacteroides sp. CAG:409 RepID=R7JFQ9_9PORP
Alpha-mannosidase {ECO:0000313|EMBL:CDE62744.1}; TaxID=1262913 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:409.;"
Displaying 13 items

View Taxonomy