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SCNpilot_bf_inoc_scaffold_255_curated

Search features with annotation key words

Displaying items 1-30 of 334 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_255_curated_1
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1..1458)
DNA (1458bp) protein (486aa)
DNA topoisomerase III; K03169 DNA topoisomerase III [EC:5.99.1.2]
DNA topoisomerase III {ECO:0000313|EMBL:ADZ80147.1}; EC=5.99.1.2 {ECO:0000313|EMBL:ADZ80147.1};; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
DNA topoisomerase III n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C772_SPHS2
SCNpilot_bf_inoc_scaffold_255_curated_2
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1482..3077)
DNA (1596bp) protein (532aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S6U1_PEDSD
Uncharacterized protein {ECO:0000313|EMBL:CDS99028.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_255_curated_3
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3165..3473)
DNA (309bp) protein (103aa)
Uncharacterized protein n=2 Tax=Sphingobacteriaceae RepID=F0S6U0_PEDSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY52200.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
SCNpilot_bf_inoc_scaffold_255_curated_4
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(4492..5334)
DNA (843bp) protein (281aa)
Putative uncharacterized protein n=1 Tax=Myroides odoratimimus CCUG 12901 RepID=H1GZB6_9FLAO
tetracycline regulation of excision, rtec
Tetracycline regulation of excision, RteC {ECO:0000313|EMBL:ADQ15983.1}; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;"
SCNpilot_bf_inoc_scaffold_255_curated_5
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

5681..8143
DNA (2463bp) protein (821aa)
Peptidase s8 and s53 subtilisin kexin sedolisin n=1 Tax=Flavobacterium columnare (strain ATCC 49512 / CIP 103533 / TG 44/87) RepID=G8X4N2_FLACA
Uncharacterized protein {ECO:0000313|EMBL:GAE63025.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
peptidase s8 and s53 subtilisin kexin sedolisin
SCNpilot_bf_inoc_scaffold_255_curated_6
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8132..9166)
DNA (1035bp) protein (345aa)
ATPase AAA n=1 Tax=Flavobacterium columnare (strain ATCC 49512 / CIP 103533 / TG 44/87) RepID=G8X4N1_FLACA
Uncharacterized protein {ECO:0000313|EMBL:GAE63024.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
ATPase AAA
SCNpilot_bf_inoc_scaffold_255_curated_7
Chryseobacterium oranimense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9279..10442)
DNA (1164bp) protein (388aa)
Uncharacterized protein n=4 Tax=Riemerella anatipestifer RepID=F0TL71_RIEAR
Uncharacterized protein {ECO:0000313|EMBL:CEJ72100.1}; TaxID=1300143 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium oranimense G311.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_255_curated_8
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

comp(10447..11301)
DNA (855bp) protein (285aa)
RNA-directed DNA polymerase from retron (EC:2.7.7.49); K00986 RNA-directed DNA polymerase [EC:2.7.7.49]
Putative RNA-directed DNA polymerase from retron n=1 Tax=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) RepID=Q5LDK2_BACFN
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
SCNpilot_bf_inoc_scaffold_255_curated_9
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11276..11572)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6STS1_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU27820.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
HTH_3 family transcriptional regulator protein
SCNpilot_bf_inoc_scaffold_255_curated_10
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

comp(11653..11871)
DNA (219bp) protein (73aa)
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
SCNpilot_bf_inoc_scaffold_255_curated_11
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12666..12980
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036D790D
Uncharacterized protein {ECO:0000313|EMBL:EDY95299.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_255_curated_12
unknown

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comp(13024..13122)
DNA (99bp) protein (33aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_255_curated_13
unknown

Not on your lists

comp(13119..13316)
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_255_curated_14
Flavobacterium rivuli, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13361..14683)
DNA (1323bp) protein (441aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI00035D9BF5
Uncharacterized protein {ECO:0000313|EMBL:KGO85781.1}; TaxID=1121895 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium rivuli WB 3.3-2 = DSM 21788.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_255_curated_15
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14922..15770
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Pseudomonas sp. PAMC 25886 RepID=UPI000288DC45
Uncharacterized protein {ECO:0000313|EMBL:KIN89098.1}; TaxID=1572758 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_255_curated_16
unknown

Not on your lists

15774..16106
DNA (333bp) protein (111aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_255_curated_17
Prevotella nigrescens, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16203..17288
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Prevotella nigrescens F0103 RepID=L9PU22_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ELX66337.1}; TaxID=702439 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella nigrescens F0103.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_255_curated_18
Prevotella nigrescens, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17297..17632
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Prevotella nigrescens F0103 RepID=L9PRY3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ELX66336.1}; TaxID=702439 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella nigrescens F0103.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_255_curated_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17613..18212
DNA (600bp) protein (200aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=I8WWL8_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIY50305.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
SCNpilot_bf_inoc_scaffold_255_curated_20
unknown

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comp(18349..18621)
DNA (273bp) protein (91aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_255_curated_21
unknown

Not on your lists

18748..18897
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_255_curated_22
Oscillatoriales cyanobacterium JSC-12, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

18897..19262
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Oscillatoriales cyanobacterium JSC-12 RepID=K8GIP6_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:EKQ67674.1}; TaxID=864702 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales.;" source="Oscillatoriales cyanobacterium JSC-12.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_255_curated_23
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19268..19819
DNA (552bp) protein (184aa)
methyladenine glycosylase; K01246 DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
DNA-3-methyladenine glycosylase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036C541C
DNA-3-methyladenine glycosylase {ECO:0000313|EMBL:KIC95935.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
SCNpilot_bf_inoc_scaffold_255_curated_24
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19972..20589
DNA (618bp) protein (206aa)
Transcriptional regulator, TetR family n=1 Tax=Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338) RepID=G8UJC8_TANFA
Transcriptional regulator, TetR family {ECO:0000313|EMBL:BAR49529.1}; TaxID=1307832 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia 3313.;"
TetR family transcriptional regulator
SCNpilot_bf_inoc_scaffold_255_curated_25
Bacteroides salanitronis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20766..22037
DNA (1272bp) protein (424aa)
Outer membrane efflux protein n=1 Tax=Bacteroides salanitronis (strain DSM 18170 / JCM 13567 / BL78) RepID=F0R1N3_BACSH
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:ADY35356.1}; Flags: Precursor;; TaxID=667015 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salanitronis (strain DSM 18170 / JCM 13567 / BL78).;"
SCNpilot_bf_inoc_scaffold_255_curated_26
Bacteroides sp. CAG:144, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22119..23018
DNA (900bp) protein (300aa)
Putative ABC transport system lipoprotein n=1 Tax=Bacteroides sp. CAG:144 RepID=R5Y3V7_9BACE
Putative ABC transport system lipoprotein {ECO:0000313|EMBL:CDA21515.1}; TaxID=1262736 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:144.;"
ABC transporter lipoprotein; K01993 HlyD family secretion protein
SCNpilot_bf_inoc_scaffold_255_curated_27
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23021..23941
DNA (921bp) protein (307aa)
sulfate-transporting ATPase (EC:3.6.3.25)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IYH2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK01607.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
SCNpilot_bf_inoc_scaffold_255_curated_28
Bacteroides sp. CAG:144, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23931..24674
DNA (744bp) protein (248aa)
sulfate-transporting ATPase (EC:3.6.3.25)
ABC transporter ATP-binding protein n=1 Tax=Bacteroides sp. CAG:144 RepID=R5YY65_9BACE
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDA21512.1}; TaxID=1262736 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:144.;"
SCNpilot_bf_inoc_scaffold_255_curated_29
Bacteroides sp. CAG:144, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24678..25784
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:144 RepID=R5YJN1_9BACE
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1262736 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:144.;"
ABC-2 type transporter; K09686 antibiotic transport system permease protein
SCNpilot_bf_inoc_scaffold_255_curated_30
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25791..26189
DNA (399bp) protein (133aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IYH6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK01611.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
ABC transporter permease; K01992 ABC-2 type transport system permease protein
Displaying items 1-30 of 334 in total

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