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SCNpilot_bf_inoc_scaffold_1486_curated

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_1486_curated_1
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1..1338)
DNA (1338bp) protein (446aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035EF838
Uncharacterized protein {ECO:0000313|EMBL:CEA15942.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
dipeptidase
SCNpilot_bf_inoc_scaffold_1486_curated_2
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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1608..1922
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000362C02A
septum formation initiator-like protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_1486_curated_3
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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2030..2374
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003613930
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_1486_curated_4
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2406..3716
DNA (1311bp) protein (437aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000372EE47
Uncharacterized protein {ECO:0000313|EMBL:CEA15939.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
two-component response regulator transcriptional regulatory protein
SCNpilot_bf_inoc_scaffold_1486_curated_5
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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3725..6247
DNA (2523bp) protein (841aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037DA495
two-component system sensor histidine kinase
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_1486_curated_6
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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6249..7139
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036AD122
tyrosine type site-specific recombinase; K04763 integrase/recombinase XerD
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_1486_curated_7
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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7328..8452
DNA (1125bp) protein (375aa)
DNA polymerase III subunit beta; K02338 DNA polymerase III subunit beta [EC:2.7.7.7]
DNA polymerase III subunit beta n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003805707
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_1486_curated_8
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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8463..9233
DNA (771bp) protein (257aa)
DNA polymerase III subunit epsilon; K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7]
DNA polymerase III subunit epsilon n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000376931D
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_1486_curated_9
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9324..10142
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003711874
Uncharacterized protein {ECO:0000313|EMBL:EGK06142.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1486_curated_10
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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10180..10929
DNA (750bp) protein (250aa)
truA; tRNA pseudouridine synthase A (EC:5.4.99.12); K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036FF4BF
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_1486_curated_11
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(10987..12381)
DNA (1395bp) protein (465aa)
major facilitator transporter n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000381AD2C
major facilitator transporter
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_1486_curated_12
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(12465..13790)
DNA (1326bp) protein (442aa)
D-xylose isomerase (EC:5.3.1.5)
xylose isomerase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036A273F
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_1486_curated_13
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(13916..15391)
DNA (1476bp) protein (492aa)
xylulokinase; K00854 xylulokinase [EC:2.7.1.17]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035DA6E8
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_1486_curated_14
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(15660..17357)
DNA (1698bp) protein (566aa)
glycoside hydrolase; K01198 xylan 1,4-beta-xylosidase [EC:3.2.1.37]; K01209 alpha-N-arabinofuranosidase [EC:3.2.1.55]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000370910F
Uncharacterized protein {ECO:0000313|EMBL:EGK02280.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
SCNpilot_bf_inoc_scaffold_1486_curated_15
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(17366..18721)
DNA (1356bp) protein (452aa)
alpha-glucuronidase (EC:3.2.1.139); K01235 alpha-glucuronidase [EC:3.2.1.139]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036FABDB
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_1486_curated_16
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19420..20391)
DNA (972bp) protein (324aa)
xylosidase/arabinosidase (EC:3.2.1.37)
Beta-xylosidase id=2022050 bin=GWD2_Bacteroidales_45_23 species=uncultured organism genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_1486_curated_17
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20399..21553)
DNA (1155bp) protein (385aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035E12BE
beta-1,4-xylanase
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_1486_curated_18
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(21597..23000)
DNA (1404bp) protein (468aa)
sugar transporter n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036838A6
glycoside/pentoside/hexuronide transporter
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_1486_curated_19
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23098..25020)
DNA (1923bp) protein (641aa)
sialic acid-specific 9-O-acetylesterase; K05970 sialate O-acetylesterase [EC:3.1.1.53]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035EA439
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_1486_curated_20
Bacteroides cellulosilyticus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(25231..26649)
DNA (1419bp) protein (473aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036CA259
Glycosyl hydrolase family 35 {ECO:0000313|EMBL:EEF88942.1}; TaxID=537012 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides cellulosilyticus DSM 14838.;"
mannonate dehydratase
Displaying 20 items

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