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SCNpilot_bf_inoc_scaffold_1915_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_1915_curated_1
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3..563
DNA (561bp) protein (187aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=A6LC01_PARD8
Uncharacterized protein {ECO:0000313|EMBL:KKB50678.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1915_curated_2
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(521..904)
DNA (384bp) protein (128aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K5Y514_9PORP
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:EKN08232.1}; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii CL02T12C30.;"
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
SCNpilot_bf_inoc_scaffold_1915_curated_3
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(917..1414)
DNA (498bp) protein (166aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=A6LC03_PARD8
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EFI08087.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
SCNpilot_bf_inoc_scaffold_1915_curated_4
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1499..3769
DNA (2271bp) protein (757aa)
TrkA C-terminal domain protein n=2 Tax=Bacteroidales RepID=C7XA74_9PORP
TrkA C-terminal domain protein {ECO:0000313|EMBL:EEU51151.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
Na+/H+ antiporter; K03455 monovalent cation:H+ antiporter-2, CPA2 family
SCNpilot_bf_inoc_scaffold_1915_curated_5
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3984..4733
DNA (750bp) protein (250aa)
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008};; CMP-2-keto-3-deoxyoctulosonic acid synthase {ECO:0000256|HAMAP-Rule:MF_00057}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
3-deoxy-manno-octulosonate cytidylyltransferase (EC:2.7.7.38); K00979 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
3-deoxy-manno-octulosonate cytidylyltransferase n=3 Tax=Parabacteroides RepID=A7AKM8_9PORP
SCNpilot_bf_inoc_scaffold_1915_curated_6
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5087..5656)
DNA (570bp) protein (190aa)
DNA-3-methyladenine glycosylase I (EC:3.2.2.20); K01246 DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IT24_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGJ99817.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
SCNpilot_bf_inoc_scaffold_1915_curated_7
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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6270..6704
DNA (435bp) protein (145aa)
GNAT family acetyltransferase {ECO:0000313|EMBL:KIA90695.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
gcn5-related n-acetyltransferase id=4550157 bin=GWF2_Bacteroidetes_29_10 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_29_10 organism_group=Bacteroidetes
acetyltransferase
SCNpilot_bf_inoc_scaffold_1915_curated_8
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria

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6711..7784
DNA (1074bp) protein (358aa)
Putative amino acid racemase n=1 Tax=Saprospira grandis DSM 2844 RepID=J0XUQ0_9SPHI
amino acid racemase
Tax=BJP_IG2102_Bacteroidetes_40_9
SCNpilot_bf_inoc_scaffold_1915_curated_9
Odoribacter splanchnicus CAG:14, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7862..10018
DNA (2157bp) protein (719aa)
alpha-glycosidase; K07407 alpha-galactosidase [EC:3.2.1.22]
Alpha-galactosidase n=1 Tax=Odoribacter splanchnicus CAG:14 RepID=R6F2Z5_9PORP
Alpha-galactosidase {ECO:0000313|EMBL:CDB07393.1}; TaxID=1263090 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter splanchnicus CAG:14.;"
SCNpilot_bf_inoc_scaffold_1915_curated_10
Bacteroides graminisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10085..10960)
DNA (876bp) protein (292aa)
Membrane protein n=3 Tax=Bacteroides fragilis RepID=E4VQD2_BACFG
Nodulin 21-related protein {ECO:0000313|EMBL:GAK37730.1}; TaxID=1121097 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides graminisolvens DSM 19988 = JCM 15093.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1915_curated_11
unknown

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comp(10975..11109)
DNA (135bp) protein (45aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1915_curated_12
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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11232..11459
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6AGN0_9PORP
beta-lactamase class C 6-aminohexanoate-dimer hydrolase
Beta-lactamase family protein {ECO:0000313|EMBL:KDS57693.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
Displaying 12 items

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